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Aliases : VCV51_032629
Description : biopolymer transporter ExbD/TolR [Ensembl]. Biopolymer transport protein ExbD/TolR [Interproscan].
Gene families : OG_02_0000513 (OrthoFinder) Phylogenetic Tree(s): OG0000513_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA58938 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73832 | tolR, b0738 | membrane spanning protein in TolA-TolQ-TolR complex... | 0.04 | OrthoFinder | |
| AAL19690 | STM0746, tolR | tol protein, role in outer membrane integrity [Ensembl].... | 0.05 | OrthoFinder | |
| AHY39383 | CJ8421_00560 | exbD/tolR family transport protein [Ensembl]. Biopolymer... | 0.05 | OrthoFinder | |
| EDJ91617 | CGSHi22421_07597 | membrane spanning protein in TolA-TolQ-TolR complex... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000270 | peptidoglycan metabolic process | IEP | Enrichment |
| MF | GO:0004040 | amidase activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Enrichment |
| BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| MF | GO:0008144 | drug binding | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008658 | penicillin binding | IEP | Enrichment |
| MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0009253 | peptidoglycan catabolic process | IEP | Enrichment |
| CC | GO:0009295 | nucleoid | IEP | Enrichment |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0032784 | regulation of DNA-templated transcription, elongation | IEP | Enrichment |
| MF | GO:0033218 | amide binding | IEP | Enrichment |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | Enrichment |
| CC | GO:0042597 | periplasmic space | IEP | Enrichment |
| BP | GO:0043165 | Gram-negative-bacterium-type cell outer membrane assembly | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0043213 | bacteriocin transport | IEP | Enrichment |
| MF | GO:0045301 | tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity | IEP | Enrichment |
| BP | GO:0051259 | protein complex oligomerization | IEP | Enrichment |
| BP | GO:0061024 | membrane organization | IEP | Enrichment |
| BP | GO:0070206 | protein trimerization | IEP | Enrichment |
| BP | GO:0071709 | membrane assembly | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003400 | ExbD | 9 | 145 |
| No external refs found! |