KNA58940 (VCV51_032631, TolB)

Aliases : VCV51_032631, TolB

Description : tol-Pal system beta propeller repeat protein TolB [Ensembl]. TolB amino-terminal domain, WD40-like Beta Propeller Repeat [Interproscan].

Gene families : OG_02_0001896 (OrthoFinder) Phylogenetic Tree(s): OG0001896_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA58940
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73834 tolB, b0740 periplasmic protein [Ensembl]. TolB amino-terminal... 0.04 OrthoFinder
AAL19692 STM0748, tolB tol protein required for outer membrane integrity... 0.04 OrthoFinder
AGT25226 N559_3578, TolB translocation protein TolB [Ensembl]. TolB... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042597 periplasmic space IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0009295 nucleoid IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
InterPro domains Description Start Stop
IPR011659 PD40 213 239
IPR011659 PD40 292 327
IPR011659 PD40 248 283
IPR007195 TolB_N 15 117
No external refs found!