KNA59413 (VCV51_032593)


Aliases : VCV51_032593

Description : LysR substrate binding domain-containing protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59413
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC74667 ynfL, b1595 LysR family putative transcriptional regulator... 0.03 OrthoFinder
AKI48958 L2625_01040 transcriptional regulator, LysR family [Ensembl].... 0.03 OrthoFinder
CRP45508 benM_8 Ben and cat operon transcriptional regulator [Ensembl].... 0.03 OrthoFinder
EDJ91352 CGSHi22421_04593 putative HTH-type transcriptional regulator [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008773 [protein-PII] uridylyltransferase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 64
IPR005119 LysR_subst-bd 91 292
No external refs found!