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  5. KNA59599

KNA59599 (VCV51_031404)


Aliases : VCV51_031404

Description : succinate dehydrogenase [Ensembl]. FAD binding domain, Fumarate reductase flavoprotein C-term [Interproscan].


Gene families : OG_02_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59599
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC73817 sdhA, b0723 succinate dehydrogenase, flavoprotein subunit [Ensembl].... 0.11 OrthoFinder
AAL19678 STM0734, sdhA succinate dehydrogenase, flavoprotein subunit [Ensembl].... 0.14 OrthoFinder
AAL21535 STM2641, nadB quinolinate synthetase, B protein [Ensembl]. FAD binding... 0.03 OrthoFinder
AHY39665 CJ8421_02050 fumarate reductase flavoprotein subunit [Ensembl]. FAD... 0.05 OrthoFinder
AHY39693 CJ8421_02190 succinate dehydrogenase flavoprotein subunit [Ensembl].... 0.04 OrthoFinder
CCP42977 Rv0248c Probable succinate dehydrogenase [iron-sulfur subunit]... 0.02 OrthoFinder
CCP44316 frdA, Rv1552 Probable fumarate reductase [flavoprotein subunit] FrdA... 0.03 OrthoFinder
CPC38527 sdhA_1, ERS093114_00277 Succinate dehydrogenase flavoprotein subunit [Ensembl].... 0.05 OrthoFinder
CRP29510 sdhA_2 Succinate dehydrogenase flavoprotein subunit [Ensembl].... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006103 2-oxoglutarate metabolic process IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006538 glutamate catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019551 glutamate catabolic process to 2-oxoglutarate IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
MF GO:0033691 sialic acid binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043649 dicarboxylic acid catabolic process IEP Enrichment
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051254 positive regulation of RNA metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 441 569
IPR003953 FAD-binding_2 1 386
No external refs found!