1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA59600

KNA59600 (VCV51_031402)


Aliases : VCV51_031402

Description : succinate dehydrogenase and fumarate reductase iron-sulfur protein [Ensembl]. 4Fe-4S dicluster domain, 2Fe-2S iron-sulfur cluster binding domain [Interproscan].


Gene families : OG_02_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59600
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC73818 sdhB, b0724 succinate dehydrogenase, FeS subunit [Ensembl]. 4Fe-4S... 0.08 OrthoFinder
AAL19679 STM0735, sdhB succinate dehydrogenase, Fe-S protein [Ensembl]. 4Fe-4S... 0.11 OrthoFinder
AGT25240 N559_3593 succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.09 OrthoFinder
AHY39666 frdB, CJ8421_02055 fumarate reductase iron-sulfur subunit [Ensembl]. 4Fe-4S... 0.05 OrthoFinder
AHY39694 CJ8421_02195 succinate dehydrogenase, iron-sulfur protein subunit... 0.03 OrthoFinder
AKP16041 sdhB, WX61_02014 Succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.04 OrthoFinder
CBI66933 frdB, HPB8_1376 fumarate reductase iron-sulfur protein [Ensembl]. 4Fe-4S... 0.03 OrthoFinder
CCP42976 Rv0247c Probable succinate dehydrogenase [iron-sulfur subunit]... 0.02 OrthoFinder
CCP46139 sdhB, Rv3319 Probable succinate dehydrogenase (iron-sulphur protein... 0.01 OrthoFinder
CPC38497 sdhB_1, ERS093114_00276 succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.07 OrthoFinder
CRP29482 sdhB Succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0006103 2-oxoglutarate metabolic process IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006538 glutamate catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
CC GO:0009288 bacterial-type flagellum IEP Enrichment
CC GO:0009424 bacterial-type flagellum hook IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019551 glutamate catabolic process to 2-oxoglutarate IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0033691 sialic acid binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
BP GO:0043649 dicarboxylic acid catabolic process IEP Enrichment
BP GO:0044780 bacterial-type flagellum assembly IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR025192 Succ_DH/fum_Rdtase_N 5 109
No external refs found!