1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA59810

KNA59810 (VCV51_030870)


Aliases : VCV51_030870

Description : lysine-arginine-ornithine-binding periplasmic protein [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59810
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC73898 glnH, b0811 glutamine transporter subunit [Ensembl]. Bacterial... 0.03 OrthoFinder
AAC73947 artJ, b0860 arginine ABC transporter periplasmic binding protein... 0.06 OrthoFinder
AAC73950 artI, b0863 arginine transporter subunit [Ensembl]. Bacterial... 0.08 OrthoFinder
AAC74987 tcyJ, b1920 cystine transporter subunit [Ensembl]. Bacterial... 0.03 OrthoFinder
AAC75369 hisJ, b2309 histidine ABC transporter periplasmic binding protein... 0.05 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.03 OrthoFinder
AAL00055 spr1251, glnH ABC transporter substrate-binding... 0.04 OrthoFinder
AAL19766 STM0830, glnH glutamine high-affinity transporter [Ensembl]. Bacterial... 0.04 OrthoFinder
AAL19822 STM0887, artJ arginine 3rd transport system [Ensembl]. Bacterial... 0.06 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.06 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.05 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.04 OrthoFinder
AGT23903 N559_2191 amino acid ABC transport system periplasmic binding... 0.06 OrthoFinder
AGT25040 N559_3387 arginine 3rd transport system periplasmic binding... 0.08 OrthoFinder
AGT25453 N559_3817 amino acid ABC transporter periplasmic amino... 0.04 OrthoFinder
AKI49732 L2625_01873 amino acid ABC transporter, amino acid-binding protein... 0.03 OrthoFinder
AKI50283 L2625_02451 polar amino acid ABC transporter, substrate-binding... 0.04 OrthoFinder
CBI66165 yckK, HPB8_608 putative polar amino acid transport system... 0.03 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.03 OrthoFinder
CCL18016 BN171_2030002 ABC-type transport system, aminoacid-family... 0.04 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CRO48561 hisJ Histidine-binding periplasmic protein precursor... 0.03 OrthoFinder
EDJ90649 CGSHi22421_04048 arginine transporter permease subunit ArtQ [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006171 cAMP biosynthetic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
BP GO:0046058 cAMP metabolic process IEP Enrichment
MF GO:0047605 acetolactate decarboxylase activity IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 23 243
No external refs found!