KNA59937 (VCV51_032348)

Aliases : VCV51_032348

Description : LysR substrate binding domain-containing protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000139 (OrthoFinder) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA59937
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AAC75850	gcvA, b2808	glycine cleavage system transcriptional activator;...	0.03	OrthoFinder
AGT23542	N559_1808	LysR family transcriptional regulator [Ensembl]. LysR...	0.04	OrthoFinder
AGT25375	N559_3737	glycine cleavage system transcriptional activator...	0.03	OrthoFinder
CRO48355	gcvA_5	Gcv operon activator [Ensembl]. LysR substrate binding...	0.03	OrthoFinder
CRO53395	gcvA_6	Gcv operon activator [Ensembl]. LysR substrate binding...	0.03	OrthoFinder
CRP62462	gcvA_8	Gcv operon activator [Ensembl]. LysR substrate binding...	0.03	OrthoFinder
CRP69065	gcvA_9	Gcv operon activator [Ensembl]. LysR substrate binding...	0.03	OrthoFinder
CRP69233	gcvA_10	Gcv operon activator [Ensembl]. LysR substrate binding...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006817	phosphate ion transport	IEP	Enrichment
BP	GO:0006820	anion transport	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
BP	GO:0015698	inorganic anion transport	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0044341	sodium-dependent phosphate transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	92	293
IPR000847	Tscrpt_reg_HTH_LysR	7	65

External Links

No external refs found!

KNA59937 (VCV51_032348)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation