1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA59940

KNA59940 (VCV51_032352)


Aliases : VCV51_032352

Description : CHASE domain-containing protein [Ensembl]. CHASE domain, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA59940
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AGT24348 N559_2672 putative transport protein [Ensembl]. GGDEF domain... 0.03 OrthoFinder
AGT25034 N559_3381 diguanylate cyclase domain protein [Ensembl]. GGDEF... 0.03 OrthoFinder
CCL18642 BN171_2480017 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.02 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006189 CHASE_dom 109 221
IPR000160 GGDEF_dom 294 451
No external refs found!