KNA59959 (VCV51_032371)

Aliases : VCV51_032371

Description : GGDEF domain-containing protein [Ensembl]. PAS fold, Diguanylate cyclase [Interproscan].

Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA59959
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC73921 dgcI, b0834 putative membrane-anchored diguanylate cyclase... 0.03 OrthoFinder
AAC74423 dgcM, b1341 diguanylate cyclase, csgD regulator [Ensembl]. PAS fold,... 0.03 OrthoFinder
AGT26512 N559_4928 hypothetical protein [Ensembl]. GGDEF domain, Cache... 0.04 OrthoFinder
CCL17606 BN171_1610002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.03 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.04 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.02 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder
CRP06194 ydaM_2 putative diguanylate cyclase YdaM [Ensembl]. Diguanylate... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013656 PAS_4 36 145
IPR000160 GGDEF_dom 157 312
No external refs found!