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  5. KNA60550

KNA60550 (VCV51_032221)


Aliases : VCV51_032221

Description : response regulator receiver domain-containing protein [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA60550
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AAC75035 hprR, b1969 response regulator family protein [Ensembl].... 0.02 OrthoFinder
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.01 OrthoFinder
AAC76430 ompR, b3405 response regulator in two-component regulatory system... 0.03 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.03 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.02 OrthoFinder
AAL22364 STM3502, ompR response regulator in two-component regulatory system... 0.03 OrthoFinder
AGT22192 N559_0379 osmolarity response regulator [Ensembl]. Response... 0.03 OrthoFinder
AGT22533 N559_0740, QseB DNA-binding transcriptional regulator QseB [Ensembl].... 0.03 OrthoFinder
AGT25698 N559_4072, PhoB transcriptional regulator PhoB [Ensembl]. Response... 0.03 OrthoFinder
AGT26042 N559_4437, CreB DNA-binding response regulator CreB [Ensembl]. Response... 0.03 OrthoFinder
AGT26400 N559_4812 putative response regulator [Ensembl]. Response... 0.04 OrthoFinder
AHY39611 CJ8421_01780 two-component regulator [Ensembl]. Transcriptional... 0.04 OrthoFinder
AHY40431 CJ8421_06120 DNA-binding response regulator [Ensembl].... 0.04 OrthoFinder
AKI49374 lisR, L2625_01474 two component response regulator [Ensembl].... 0.03 OrthoFinder
AKI49504 L2625_01607 DNA-binding response regulator [Ensembl]. Signal... 0.03 OrthoFinder
AKI50350 cesR, L2625_02538 DNA-binding two-component response regulator [Ensembl].... 0.03 OrthoFinder
CCL17156 BN171_1330017 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL17733 BN171_1740008 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL20068 BN171_3690012 Two-component response regulator, CheY family [Ensembl].... 0.03 OrthoFinder
CCL20132 BN171_370006 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.01 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.01 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRO88807 walR_1 Transcriptional regulatory protein WalR [Ensembl].... 0.03 OrthoFinder
CRP18948 ompR_3 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP27775 kdpE KDP operon transcriptional regulatory protein KdpE... 0.03 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.02 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.01 OrthoFinder
KNA56836 VCV51_030475, PhoB phosphate regulon transcriptional regulatory protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0042618 poly-hydroxybutyrate metabolic process IEP Enrichment
BP GO:0042619 poly-hydroxybutyrate biosynthetic process IEP Enrichment
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051254 positive regulation of RNA metabolic process IEP Enrichment
BP GO:1901440 poly(hydroxyalkanoate) metabolic process IEP Enrichment
BP GO:1901441 poly(hydroxyalkanoate) biosynthetic process IEP Enrichment
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 4 112
IPR001867 OmpR/PhoB-type_DNA-bd 146 216
No external refs found!