KNA60659 (VCV51_032098)

Aliases : VCV51_032098

Description : lacI family Bacterial regulatory protein [Ensembl]. Bacterial regulatory proteins, Periplasmic binding protein-like domain [Interproscan].

Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA60659
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AAL00442	spr1639, ccpA	Catabolite control protein [Ensembl]. Bacterial...	0.04	OrthoFinder
AAL21095	STM2191, galS	GalR/LacI family transcriptional repressor of mgl operon...	0.04	OrthoFinder
AAL22744	STM3886, rbsR	transcriptional repressor for rbs operon (GalR/LacI...	0.03	OrthoFinder
AAL22934	STM4094, cytR	GalR/LacI family transcriptional repressor [Ensembl]....	0.04	OrthoFinder
AGT22772	N559_0986	putative transcriptional regulator [Ensembl]....	0.05	OrthoFinder
AGT22777	N559_0991, GalR	DNA-binding transcriptional regulator GalR [Ensembl]....	0.06	OrthoFinder
AGT24235	N559_2553	putative periplasmic binding protein/LacI...	0.03	OrthoFinder
AGT24386	N559_2710	lac repressor [Ensembl]. Periplasmic binding...	0.05	OrthoFinder
AGT25335	N559_3695	putative periplasmic binding protein/LacI...	0.04	OrthoFinder
AGT25422	N559_3786	transcriptional regulator, LacI family [Ensembl]....	0.03	OrthoFinder
AGT26654	N559_5077	repressor of galETK operon [Ensembl]. Periplasmic...	0.03	OrthoFinder
CCG27166	No alias	Catabolite control protein A [Ensembl]. Bacterial...	0.03	OrthoFinder
CCL16946	BN171_1020013	Transcriptional regulator, LacI family [Ensembl]....	0.03	OrthoFinder
CCL17239	ccpA, BN171_1410001	Transcriptional regulator, LacI family [Ensembl]....	0.03	OrthoFinder
CCL20673	BN171_880009	Transcriptional regulator, LacI family [Ensembl]....	0.04	OrthoFinder
KNA56019	VCV51_030935	lacI family Bacterial regulatory protein [Ensembl]....	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008134	transcription factor binding	IEP	Enrichment
BP	GO:0015858	nucleoside transport	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
BP	GO:0034258	nicotinamide riboside transport	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000843	HTH_LacI	3	48

External Links

No external refs found!

KNA60659 (VCV51_032098)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation