KNA60704 (VCV51_032143, SoxR)

Aliases : VCV51_032143, SoxR

Description : redox-sensitive transcriptional activator SoxR [Ensembl]. MerR family regulatory protein [Interproscan].

Gene families : OG_02_0001693 (OrthoFinder) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA60704
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method	Actions
CRO70159	soxR_2	Redox-sensitive transcriptional activator SoxR...	0.04	OrthoFinder
CRP48126	soxR_3	Redox-sensitive transcriptional activator SoxR...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Enrichment
MF	GO:0008509	anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Enrichment
MF	GO:0042925	benzoate transmembrane transporter activity	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000551	MerR-type_HTH_dom	4	40
IPR015358	Tscrpt_reg_MerR_DNA-bd	45	110

External Links

No external refs found!