1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA60922

KNA60922 (VCV51_031896)


Aliases : VCV51_031896

Description : binding-protein-dependent transport system inner membrane component [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA60922
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAC75239 yejB, b2178 microcin C ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAL21120 STM2217, yejB putative ABC-type dipeptide/oligopeptide/nickel... 0.03 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT23388 N559_1642 ABC transporter, permease protein [Ensembl].... 0.05 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.03 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPC95781 gsiC, ERS093114_01725 Oligopeptide transport system permease protein... 0.03 OrthoFinder
CRO37911 yejB_2 Inner membrane ABC transporter permease protein YejB... 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 153 360
No external refs found!