1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA60984

KNA60984 (VCV51_031959)


Aliases : VCV51_031959

Description : OmpA family protein [Ensembl]. OmpA family [Interproscan].


Gene families : OG_02_0000067 (OrthoFinder) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA60984
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AAC75654 yfiB, b2605 OM lipoprotein putative positive effector of YfiN... 0.03 OrthoFinder
AGT25225 N559_3577 peptidoglycan-associated outer membrane lipoprotein... 0.04 OrthoFinder
AHY39386 CJ8421_00575 peptidoglycan-associated lipoprotein Omp18 [Ensembl].... 0.03 OrthoFinder
AHY40657 CJ8421_07400 outer membrane fibronectin-binding protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006665 OmpA-like 99 193
No external refs found!