AEA93578 (addA, OG1RF_10891)

Aliases : addA, OG1RF_10891

Description : ATP-dependent nuclease subunit A [Ensembl]. PD-(D/E)XK nuclease superfamily, UvrD/REP helicase N-terminal domain, UvrD-like helicase C-terminal domain [Interproscan].

Gene families : OG_02_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA93578
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
AKI50264	addA, L2625_02432	ATP-dependent nuclease, subunit A [Ensembl]. UvrD/AddA...	0.04	OrthoFinder
AKP15210	uvrD, WX61_01161	DNA helicase II [Ensembl]. UvrD/REP helicase N-terminal...	0.02	OrthoFinder
AKP16203	rep, WX61_02179	ATP-dependent DNA helicase Rep [Ensembl]. UvrD/REP...	0.02	OrthoFinder
CCL17180	BN171_1360002	Putative helicase, superfamily 1, UvrD-family [Ensembl]....	0.03	OrthoFinder
EDJ90658	CGSHi22421_04093	DNA helicase II [Ensembl]. UvrD/REP helicase N-terminal...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Enrichment
BP	GO:0006011	UDP-glucose metabolic process	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR038726	PDDEXK_AddAB-type	1085	1252
IPR014017	DNA_helicase_UvrD-like_C	480	898

External Links

No external refs found!

AEA93578 (addA, OG1RF_10891)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation