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  5. AEA94912

AEA94912 (cspA3, OG1RF_12225)


Aliases : cspA3, OG1RF_12225

Description : cold shock protein CspA [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].


Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA94912
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC74893 cspC, b1823 stress protein, member of the CspA-family [Ensembl].... 0.04 OrthoFinder
AAC76580 cspA, b3556 RNA chaperone and antiterminator, cold-inducible... 0.03 OrthoFinder
AKI49360 cspL, L2625_01458 cold-shock family protein [Ensembl]. Cold-shock protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 3 65
No external refs found!