Aliases : OG1RF_12245
Description : LacI family sugar-binding transcriptional regulator [Ensembl]. Bacterial regulatory proteins, Periplasmic binding protein-like domain [Interproscan].
Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA94932 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT22772 | N559_0986 | putative transcriptional regulator [Ensembl].... | 0.02 | OrthoFinder | |
KNA53011 | VCV51_031563 | lacI family Bacterial regulatory protein [Ensembl].... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
MF | GO:0005518 | collagen binding | IEP | Enrichment |
BP | GO:0006040 | amino sugar metabolic process | IEP | Enrichment |
BP | GO:0006050 | mannosamine metabolic process | IEP | Enrichment |
BP | GO:0006051 | N-acetylmannosamine metabolic process | IEP | Enrichment |
MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
MF | GO:0047465 | N-acylglucosamine-6-phosphate 2-epimerase activity | IEP | Enrichment |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000843 | HTH_LacI | 25 | 71 |
No external refs found! |