Aliases : OG1RF_12351
Description : ferric (Fe+3) ABC superfamily ATP binding cassette transporter, binding protein [Ensembl]. Periplasmic binding protein [Interproscan].
Gene families : OG_02_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA95038 | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC77246 | fecB, b4290 | ferric citrate ABC transporter periplasmic binding... | 0.03 | OrthoFinder | |
AAL00490 | spr1687, fatB | ABC transporter substrate-binding protein-ferric iron... | 0.05 | OrthoFinder | |
AKP15237 | yclQ_1, WX61_01188 | putative ABC transporter solute-binding protein YclQ... | 0.03 | OrthoFinder | |
CCL17854 | BN171_1840014 | ABC-type transport system, iron-family extracellular... | 0.06 | OrthoFinder | |
CCL19373 | fhuD, BN171_3080020 | ABC-type transport system, ferrichrome-specific... | 0.06 | OrthoFinder | |
CPC49474 | yclQ, ERS093114_00617 | Iron compound ABC uptake transporter substrate-binding... | 0.03 | OrthoFinder | |
CPC99411 | sirA, ERS093114_01812 | Siderophore staphylobactin ABC transporter%2C... | 0.03 | OrthoFinder | |
CPD36701 | yhfQ_2, ERS093114_02679 | iron(III) dicitrate-binding protein [Ensembl].... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006826 | iron ion transport | IEP | Enrichment |
BP | GO:0007165 | signal transduction | IEP | Enrichment |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0015093 | ferrous iron transmembrane transporter activity | IEP | Enrichment |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
BP | GO:0034219 | carbohydrate transmembrane transport | IEP | Enrichment |
BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0065007 | biological regulation | IEP | Enrichment |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002491 | ABC_transptr_periplasmic_BD | 60 | 293 |
No external refs found! |