AEA95261 (OG1RF_12574)


Aliases : OG1RF_12574

Description : response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA95261
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.01 OrthoFinder
AAC77074 basR, b4113 response regulator in two-component regulatory system... 0.03 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.05 OrthoFinder
AAK99910 spr1107, rr02 Response regulator [Ensembl]. Transcriptional regulatory... 0.05 OrthoFinder
AAL00800 spr1998, rr06 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAL21035 STM2131, baeR response regulator in two-component regulatory system... 0.02 OrthoFinder
AAL23116 STM4292, basR response regulator in two-component regulatory system... 0.02 OrthoFinder
AKI49504 L2625_01607 DNA-binding response regulator [Ensembl]. Signal... 0.04 OrthoFinder
AKP15489 ompR, WX61_01443 Transcriptional regulatory protein OmpR [Ensembl].... 0.05 OrthoFinder
CCG26420 CsrR Response regulator CsrR [Ensembl]. Response regulator... 0.03 OrthoFinder
CCG27642 No alias Two-component response regulator SA14-24 [Ensembl].... 0.03 OrthoFinder
CCL18472 BN171_2380003 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL20068 BN171_3690012 Two-component response regulator, CheY family [Ensembl].... 0.05 OrthoFinder
CCL20251 BN171_390005 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCP43225 regX3, Rv0491 Two component sensory transduction protein RegX3... 0.02 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.02 OrthoFinder
CRN89694 tctD Transcriptional regulatory protein tctD [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.01 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 158 231
IPR001789 Sig_transdc_resp-reg_receiver 6 114
No external refs found!