AAC73134 (rpsT, b0023)

Aliases : rpsT, b0023

Description : 30S ribosomal subunit protein S20 [Ensembl]. Ribosomal protein S20 [Interproscan].

Gene families : OG_02_0000739 (OrthoFinder) Phylogenetic Tree(s): OG0000739_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC73134
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AAK99544	spr0740, rpsT	30S Ribosomal protein subunit S20 [Ensembl]. Ribosomal...	0.07	OrthoFinder
AAL19007	STM0043, rpsT	30S ribosomal subunit protein S20 [Ensembl]. Ribosomal...	0.28	OrthoFinder
AEA94561	rpsT, OG1RF_11874	30S ribosomal protein S20 [Ensembl]. Ribosomal protein...	0.16	OrthoFinder
AHY40784	rpsT, CJ8421_08060	30S ribosomal protein S20 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
AKI49477	rpsT, L2625_01579	ribosomal protein S20 [Ensembl]. Ribosomal protein S20...	0.07	OrthoFinder
AKP14560	rpsT, WX61_00479	30S ribosomal protein S20 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
CCG27674	No alias	SSU ribosomal protein S20p [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
CPC82640	rpsT, ERS093114_01415	30S ribosomal protein S20 [Ensembl]. Ribosomal protein...	0.12	OrthoFinder
CRN65916	rpsT	30S ribosomal protein S20 [Ensembl]. Ribosomal protein...	0.19	OrthoFinder
EDJ91765	CGSHi22421_08418	30S ribosomal protein S20 [Ensembl]. Ribosomal protein...	0.06	OrthoFinder
KNA57452	VCV51_032842	ribosomal protein S20 [Ensembl]. Ribosomal protein S20...	0.14	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0008320	protein transmembrane transporter activity	IEP	Enrichment
BP	GO:0008653	lipopolysaccharide metabolic process	IEP	Enrichment
BP	GO:0009103	lipopolysaccharide biosynthetic process	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
MF	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0140318	protein transporter activity	IEP	Enrichment
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002583	Ribosomal_S20	1	58

External Links

UniProtKB	P0A7U7

AAC73134 (rpsT, b0023)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation