AAC73433 (prpR, b0330)

Aliases : prpR, b0330

Description : propionate catabolism operon regulatory protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC73433
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAC75907 ygeV, b2869 putative sigma-54-interacting transcriptional activator... 0.03 OrthoFinder
AAL21719 STM2839, ygaA putative EBP family regulator [Ensembl]. GAF domain,... 0.06 OrthoFinder
AGT22853 N559_1079 sigma-54 dependent transcriptional regulator [Ensembl].... 0.02 OrthoFinder
AGT26495 N559_4911 fused DNA-binding response regulator [Ensembl]. Response... 0.1 OrthoFinder
CCL17338 BN171_1440022 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.05 OrthoFinder
CCL18448 BN171_2340008 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.04 OrthoFinder
CCL19725 prdR, BN171_3420013 Transcriptional regulator, sigma-54-dependent [Ensembl].... 0.06 OrthoFinder
CRN65608 qseF Quorum-sensing regulator protein F [Ensembl]. Sigma-54... 0.06 OrthoFinder
CRN78675 acoR_1 Acetoin catabolism regulatory protein [Ensembl]. GAF... 0.02 OrthoFinder
CRO45386 zraR_4 Transcriptional regulatory protein ZraR [Ensembl].... 0.03 OrthoFinder
CRO96924 No alias (S)-limonene 6-monooxygenase [Ensembl]. PAS fold,... 0.04 OrthoFinder
CRP73274 algB_2 Alginate biosynthesis transcriptional regulatory protein... 0.04 OrthoFinder
KNA58588 VCV51_031119 psp operon transcriptional activator [Ensembl]. Sigma-54... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002197 HTH_Fis 498 527
IPR010524 Sig_transdc_resp-reg_PrpR_N 36 196
IPR002078 Sigma_54_int 219 393
UniProtKB P77743