AAC73433 (prpR, b0330)

Aliases : prpR, b0330

Description : propionate catabolism operon regulatory protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC73433
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AAC75907	ygeV, b2869	putative sigma-54-interacting transcriptional activator...	0.03	OrthoFinder
AAL21719	STM2839, ygaA	putative EBP family regulator [Ensembl]. GAF domain,...	0.06	OrthoFinder
AGT22853	N559_1079	sigma-54 dependent transcriptional regulator [Ensembl]....	0.02	OrthoFinder
AGT26495	N559_4911	fused DNA-binding response regulator [Ensembl]. Response...	0.1	OrthoFinder
CCL17338	BN171_1440022	Transcriptional regulator, sigma-54-dependent [Ensembl]....	0.05	OrthoFinder
CCL18448	BN171_2340008	Transcriptional regulator, sigma-54-dependent [Ensembl]....	0.04	OrthoFinder
CCL19725	prdR, BN171_3420013	Transcriptional regulator, sigma-54-dependent [Ensembl]....	0.06	OrthoFinder
CRN65608	qseF	Quorum-sensing regulator protein F [Ensembl]. Sigma-54...	0.06	OrthoFinder
CRN78675	acoR_1	Acetoin catabolism regulatory protein [Ensembl]. GAF...	0.02	OrthoFinder
CRO45386	zraR_4	Transcriptional regulatory protein ZraR [Ensembl]....	0.03	OrthoFinder
CRO96924	No alias	(S)-limonene 6-monooxygenase [Ensembl]. PAS fold,...	0.04	OrthoFinder
CRP73274	algB_2	Alginate biosynthesis transcriptional regulatory protein...	0.04	OrthoFinder
KNA58588	VCV51_031119	psp operon transcriptional activator [Ensembl]. Sigma-54...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
MF	GO:0008134	transcription factor binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Enrichment
BP	GO:0005984	disaccharide metabolic process	IEP	Enrichment
BP	GO:0005991	trehalose metabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
MF	GO:0015927	trehalase activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002197	HTH_Fis	498	527
IPR010524	Sig_transdc_resp-reg_PrpR_N	36	196
IPR002078	Sigma_54_int	219	393

External Links

UniProtKB	P77743

AAC73433 (prpR, b0330)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation