Aliases : cspD, b0880
Description : inhibitor of DNA replication, cold shock protein homolog [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].
Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC73967 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL19580 | STM0629, cspE | RNA chaperone, negative regulator of cspA transcription... | 0.04 | OrthoFinder | |
AAL19879 | STM0943, cspD | CspA-like protein but not cold shock induced [Ensembl].... | 0.05 | OrthoFinder | |
AGT25020 | N559_3367 | DNA replication inhibitor [Ensembl]. 'Cold-shock'... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003995 | acyl-CoA dehydrogenase activity | IEP | Enrichment |
BP | GO:0006631 | fatty acid metabolic process | IEP | Enrichment |
BP | GO:0006635 | fatty acid beta-oxidation | IEP | Enrichment |
MF | GO:0009015 | N-succinylarginine dihydrolase activity | IEP | Enrichment |
BP | GO:0009062 | fatty acid catabolic process | IEP | Enrichment |
BP | GO:0009267 | cellular response to starvation | IEP | Enrichment |
BP | GO:0016042 | lipid catabolic process | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | IEP | Enrichment |
BP | GO:0019395 | fatty acid oxidation | IEP | Enrichment |
BP | GO:0030258 | lipid modification | IEP | Enrichment |
BP | GO:0031667 | response to nutrient levels | IEP | Enrichment |
BP | GO:0031669 | cellular response to nutrient levels | IEP | Enrichment |
BP | GO:0033539 | fatty acid beta-oxidation using acyl-CoA dehydrogenase | IEP | Enrichment |
BP | GO:0034440 | lipid oxidation | IEP | Enrichment |
BP | GO:0042594 | response to starvation | IEP | Enrichment |
BP | GO:0044242 | cellular lipid catabolic process | IEP | Enrichment |
MF | GO:0050498 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002059 | CSP_DNA-bd | 3 | 65 |
UniProtKB | P0A968 |