AAC74385 (pspF, b1303)

Aliases : pspF, b1303

Description : psp operon transcriptional activator [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC74385
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAL19321 STM0367, prpR regulator for prp operon (EBP family) [Ensembl].... 0.04 OrthoFinder
AAL19603 STM0652 putative sigma-54 dependent transcriptional regulator... 0.05 OrthoFinder
AAL21262 STM2361 putative regulatory protein [Ensembl]. PAS fold,... 0.05 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.05 OrthoFinder
AKP15503 zraR, WX61_01457 Transcriptional regulatory protein ZraR [Ensembl].... 0.02 OrthoFinder
KNA54612 VCV51_030713 sigma-54 interaction domain-containing protein... 0.03 OrthoFinder
KNA55086 VCV51_031847 nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.05 OrthoFinder
KNA60791 VCV51_032053 sigma-54 interaction domain-containing protein... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 9 170
IPR002197 HTH_Fis 286 322
UniProtKB P37344