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Aliases : pspC, b1306
Description : psp operon transcription co-activator [Ensembl]. PspC domain [Interproscan].
Gene families : OG_02_0001581 (OrthoFinder) Phylogenetic Tree(s): OG0001581_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAC74388 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL20605 | STM1688, pspC | phage shock protein [Ensembl]. PspC domain [Interproscan]. | 0.07 | OrthoFinder | |
| KNA58591 | VCV51_032735 | phage shock protein C [Ensembl]. PspC domain [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006063 | uronic acid metabolic process | IEP | Enrichment |
| BP | GO:0006064 | glucuronate catabolic process | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| MF | GO:0008880 | glucuronate isomerase activity | IEP | Enrichment |
| BP | GO:0009271 | phage shock | IEP | Enrichment |
| BP | GO:0009605 | response to external stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| BP | GO:0009615 | response to virus | IEP | Enrichment |
| BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
| MF | GO:0016987 | sigma factor activity | IEP | Enrichment |
| BP | GO:0019585 | glucuronate metabolic process | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Enrichment |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Enrichment |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
| BP | GO:0051707 | response to other organism | IEP | Enrichment |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Enrichment |
| BP | GO:0098586 | cellular response to virus | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007168 | Phageshock_PspC_N | 8 | 65 |
| UniProtKB | P0AFN2 |