AAC74504 (ydcI, b1422)


Aliases : ydcI, b1422

Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0002303 (OrthoFinder) Phylogenetic Tree(s): OG0002303_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC74504
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAL20543 STM1625, ydcI putative LysR family transcriptional regulator... 0.19 OrthoFinder
AGT21919 N559_0093 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT24038 N559_2337 putative transcriptional regulator (LysR familiy)... 0.25 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
BP GO:0006743 ubiquinone metabolic process IEP Enrichment
BP GO:0006744 ubiquinone biosynthetic process IEP Enrichment
MF GO:0008813 chorismate lyase activity IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
MF GO:0009881 photoreceptor activity IEP Enrichment
MF GO:0009882 blue light photoreceptor activity IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0042180 cellular ketone metabolic process IEP Enrichment
BP GO:0042181 ketone biosynthetic process IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:1901661 quinone metabolic process IEP Enrichment
BP GO:1901663 quinone biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 13 72
IPR005119 LysR_subst-bd 101 304
UniProtKB P77171