Aliases : ydcI, b1422
Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0002303 (OrthoFinder) Phylogenetic Tree(s): OG0002303_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC74504 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL20543 | STM1625, ydcI | putative LysR family transcriptional regulator... | 0.19 | OrthoFinder | |
AGT21919 | N559_0093 | putative LysR-family transcriptional regulator... | 0.03 | OrthoFinder | |
AGT24038 | N559_2337 | putative transcriptional regulator (LysR familiy)... | 0.25 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Enrichment |
BP | GO:0006743 | ubiquinone metabolic process | IEP | Enrichment |
BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Enrichment |
MF | GO:0008813 | chorismate lyase activity | IEP | Enrichment |
BP | GO:0009267 | cellular response to starvation | IEP | Enrichment |
MF | GO:0009881 | photoreceptor activity | IEP | Enrichment |
MF | GO:0009882 | blue light photoreceptor activity | IEP | Enrichment |
BP | GO:0009991 | response to extracellular stimulus | IEP | Enrichment |
MF | GO:0016211 | ammonia ligase activity | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
MF | GO:0016833 | oxo-acid-lyase activity | IEP | Enrichment |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Enrichment |
BP | GO:0031667 | response to nutrient levels | IEP | Enrichment |
BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Enrichment |
BP | GO:0031669 | cellular response to nutrient levels | IEP | Enrichment |
MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0038023 | signaling receptor activity | IEP | Enrichment |
BP | GO:0042180 | cellular ketone metabolic process | IEP | Enrichment |
BP | GO:0042181 | ketone biosynthetic process | IEP | Enrichment |
BP | GO:0042594 | response to starvation | IEP | Enrichment |
BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
MF | GO:0060089 | molecular transducer activity | IEP | Enrichment |
BP | GO:0071496 | cellular response to external stimulus | IEP | Enrichment |
BP | GO:1901661 | quinone metabolic process | IEP | Enrichment |
BP | GO:1901663 | quinone biosynthetic process | IEP | Enrichment |
UniProtKB | P77171 |