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  5. AHY40206

AHY40206 (CJ8421_04960)


Aliases : CJ8421_04960

Description : putative transcriptional regulator (lysR family) protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40206
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAL19636 STM0692 putative LysR family transcriptional regulator... 0.03 OrthoFinder
AAL20406 STM1487, ynfL putative LysR family transcriptional regulator... 0.02 OrthoFinder
AEA93063 OG1RF_10376 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AEA93337 OG1RF_10650 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AEA94928 OG1RF_12241 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23721 N559_1994 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT26415 N559_4829 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AKP14096 tfdR, WX61_00007 HTH-type transcriptional regulator TdfR [Ensembl].... 0.03 OrthoFinder
CRO72266 cynR_2 Cyn operon transcriptional activator [Ensembl]. LysR... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043570 maintenance of DNA repeat elements IEP Enrichment
BP GO:0043571 maintenance of CRISPR repeat elements IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 61
IPR005119 LysR_subst-bd 90 287
No external refs found!