- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : lsrB, b1516
Description : autoinducer 2-binding protein [Ensembl]. Periplasmic binding protein domain [Interproscan].
Gene families : OG_02_0003504 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAC74589 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL22917 | STM4077, yneA | putative sugar transport protein [Ensembl]. Periplasmic... | 0.12 | OrthoFinder | |
| AGT22463 | N559_0667, LsrB | autoinducer 2 ABC transporter, periplasmic... | 0.14 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| BP | GO:0009267 | cellular response to starvation | IEP | Enrichment |
| BP | GO:0009991 | response to extracellular stimulus | IEP | Enrichment |
| MF | GO:0015129 | lactate transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015727 | lactate transport | IEP | Enrichment |
| BP | GO:0015850 | organic hydroxy compound transport | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
| BP | GO:0031667 | response to nutrient levels | IEP | Enrichment |
| BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Enrichment |
| BP | GO:0031669 | cellular response to nutrient levels | IEP | Enrichment |
| BP | GO:0042594 | response to starvation | IEP | Enrichment |
| MF | GO:0050498 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0071496 | cellular response to external stimulus | IEP | Enrichment |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025997 | SBP_2_dom | 30 | 285 |
| UniProtKB | P76142 |