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AAC74748 (ldtE, b1678)


Aliases : ldtE, b1678

Description : murein L,D-transpeptidase [Ensembl]. LysM domain [Interproscan].


Gene families : OG_02_0000888 (OrthoFinder) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC74748
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AAL20299 STM1375, ynhG putative LysM domain protein [Ensembl]. LysM domain... 0.07 OrthoFinder
AAL20919 STM2015, erfK putative periplasmic protein [Ensembl]. L [Interproscan]. 0.04 OrthoFinder
AGT23558 N559_1824 hypothetical protein [Ensembl]. L,D-transpeptidase... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008791 arginine N-succinyltransferase activity IEP Enrichment
MF GO:0009015 N-succinylarginine dihydrolase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
MF GO:0016748 succinyltransferase activity IEP Enrichment
MF GO:0016749 N-succinyltransferase activity IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005490 LD_TPept_cat_dom 97 232
IPR041597 Ldt_C 236 302
IPR018392 LysM_dom 42 85
UniProtKB P76193