Aliases : CJ8421_05130
Description : RND pump protein [Ensembl]. AcrB/AcrD/AcrF family [Interproscan].
Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AHY40240 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73564 | acrB, b0462 | multidrug efflux system protein [Ensembl].... | 0.03 | OrthoFinder | |
AAL21031 | STM2127, yegN | putative outer membrane receptor [Ensembl].... | 0.03 | OrthoFinder | |
AAL21375 | STM2481, acrD | RND family aminoglycoside/multidrug efflux pump... | 0.03 | OrthoFinder | |
AGT23030 | N559_1266 | RND family multidrug efflux permease protein OqxB3... | 0.02 | OrthoFinder | |
AGT23473 | N559_1732, MdtB | multidrug efflux system subunit MdtB [Ensembl].... | 0.03 | OrthoFinder | |
AGT25399 | N559_3763 | putative acridine efflux pump [Ensembl]. AcrB/AcrD/AcrF... | 0.02 | OrthoFinder | |
CRO88282 | mexB | Multidrug-efflux transporter MexB [Ensembl].... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
BP | GO:0006644 | phospholipid metabolic process | IEP | Enrichment |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001036 | Acrflvin-R | 1 | 986 |
No external refs found! |