Aliases : znuB, b1859
Description : zinc ABC transporter permease [Ensembl]. ABC 3 transport family [Interproscan].
Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC74929 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL00297 | spr1493, psaC | ABC transporter membrane-spanning permease-manganese... | 0.01 | OrthoFinder | |
AAL00778 | spr1976, adcB | ABC transporter membrane-spanning permease-Zinc (Zn2+)... | 0.02 | OrthoFinder | |
AAL21743 | STM2863, sitC | fur regulated Salmonella iron transporter [Ensembl]. ABC... | 0.02 | OrthoFinder | |
AAL21744 | STM2864, sitD | fur regulated Salmonella iron transporter [Ensembl]. ABC... | 0.01 | OrthoFinder | |
AEA92740 | zurM, OG1RF_10053 | metal cation ABC superfamily ATP binding cassette... | 0.02 | OrthoFinder | |
AEA94365 | OG1RF_11678 | ABC superfamily ATP binding cassette transporter,... | 0.02 | OrthoFinder | |
AGT22922 | N559_1153 | iron transporter: fur regulated [Ensembl]. ABC 3... | 0.01 | OrthoFinder | |
AGT22923 | N559_1154 | iron transport system inner membrane permease component... | 0.01 | OrthoFinder | |
AGT22969 | N559_1203 | putative ABC transport system permease component... | 0.08 | OrthoFinder | |
AGT23618 | N559_1885 | high-affinity zinc transporter membrane component... | 0.02 | OrthoFinder | |
AKI48124 | L2625_00151 | zinc ABC transporter, permease protein [Ensembl]. ABC... | 0.04 | OrthoFinder | |
AKI49843 | mntC, L2625_01990 | manganese ABC transporter, permease protein [Ensembl].... | 0.02 | OrthoFinder | |
AKP15480 | mntB, WX61_01434 | Manganese transport system membrane protein MntB... | 0.02 | OrthoFinder | |
CCG26737 | SitD | Manganese ABC transporter, inner membrane permease... | 0.02 | OrthoFinder | |
CRO76540 | znuB_1 | High-affinity zinc uptake system membrane protein ZnuB... | 0.06 | OrthoFinder | |
CRP72736 | znuB_2 | High-affinity zinc uptake system membrane protein ZnuB... | 0.12 | OrthoFinder | |
EDJ90086 | CGSHi22421_06568 | iron (chelated) ABC transporter permease protein... | 0.01 | OrthoFinder | |
EDJ90087 | CGSHi22421_06573 | iron (chelated) ABC transporter permease protein... | 0.02 | OrthoFinder | |
EDJ91592 | hfq, CGSHi22421_07472 | RNA-binding protein Hfq [Ensembl]. ABC 3 transport... | 0.01 | OrthoFinder | |
KNA59605 | VCV51_031395 | zinc ABC transporter permease [Ensembl]. ABC 3 transport... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005887 | integral component of plasma membrane | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008616 | queuosine biosynthetic process | IEP | Enrichment |
BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Enrichment |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Enrichment |
BP | GO:0043094 | cellular metabolic compound salvage | IEP | Enrichment |
BP | GO:0043174 | nucleoside salvage | IEP | Enrichment |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
BP | GO:0046116 | queuosine metabolic process | IEP | Enrichment |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Enrichment |
BP | GO:1990397 | queuosine salvage | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001626 | ABC_TroCD | 1 | 257 |
UniProtKB | P39832 |