AAC75256 (ccmF, b2196)

Aliases : ccmF, b2196

Description : heme lyase, CcmF subunit [Ensembl]. Cytochrome C assembly protein, Cytochrome c-type biogenesis protein CcmF C-terminal [Interproscan].

Gene families : OG_02_0000633 (OrthoFinder) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC75256
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
AAL21151	STM2249, ccmF	cytochrome c-type biogenesis protein [Ensembl]....	0.17	OrthoFinder
AAL22673	STM3814, ccmF	cytochrome c-type biogenesis protein [Ensembl]....	0.17	OrthoFinder
AGT23927	N559_2215, CcmF	cytochrome C biogenesis protein CcmF [Ensembl].	0.13	OrthoFinder
CRP40889	ccmF	Cytochrome c-type biogenesis protein CcmF [Ensembl]....	0.08	OrthoFinder
EDJ91734	CGSHi22421_08263	cytochrome c-type biogenesis protein NrfE [Ensembl]....	0.05	OrthoFinder
EDJ91889	CGSHi22421_09038	cytochrome c-type biogenesis protein CcmF [Ensembl]....	0.05	OrthoFinder
KNA59634	VCV51_031376, CcmF	cytochrome c-type biogenesis protein CcmF [Ensembl]....	0.18	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017004	cytochrome complex assembly	IEA	Interproscan
MF	GO:0020037	heme binding	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
BP	GO:0006826	iron ion transport	IEP	Enrichment
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015232	heme transmembrane transporter activity	IEP	Enrichment
BP	GO:0015886	heme transport	IEP	Enrichment
BP	GO:0017003	protein-heme linkage	IEP	Enrichment
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0071805	potassium ion transmembrane transport	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
BP	GO:1901678	iron coordination entity transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002541	Cyt_c_assembly	89	296
IPR032523	CcmF_C	316	630

External Links

UniProtKB	P33927

AAC75256 (ccmF, b2196)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation