Coexpression cluster: Cluster_3 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140110 transcription regulator activity 9.3% (20/215) 1.63 4e-06 0.00019
GO:0007155 cell adhesion 4.65% (10/215) 2.54 4e-06 0.000215
GO:0022610 biological adhesion 4.65% (10/215) 2.54 4e-06 0.000215
GO:0042995 cell projection 4.65% (10/215) 2.46 7e-06 0.000259
GO:0045229 external encapsulating structure organization 2.79% (6/215) 3.27 1.3e-05 0.000332
GO:0071555 cell wall organization 2.79% (6/215) 3.27 1.3e-05 0.000332
GO:0071554 cell wall organization or biogenesis 2.79% (6/215) 3.27 1.3e-05 0.000332
GO:0051171 regulation of nitrogen compound metabolic process 12.56% (27/215) 1.19 3.5e-05 0.000367
GO:0031323 regulation of cellular metabolic process 12.56% (27/215) 1.19 3.5e-05 0.000367
GO:0009889 regulation of biosynthetic process 12.56% (27/215) 1.2 3.2e-05 0.000373
GO:0031326 regulation of cellular biosynthetic process 12.56% (27/215) 1.2 3.2e-05 0.000373
GO:0010556 regulation of macromolecule biosynthetic process 12.56% (27/215) 1.2 3.2e-05 0.000373
GO:0019222 regulation of metabolic process 12.56% (27/215) 1.18 4.1e-05 0.000378
GO:0060255 regulation of macromolecule metabolic process 12.56% (27/215) 1.18 4.1e-05 0.000378
GO:0080090 regulation of primary metabolic process 12.56% (27/215) 1.18 3.8e-05 0.00038
GO:0019219 regulation of nucleobase-containing compound metabolic process 12.56% (27/215) 1.21 2.8e-05 0.000397
GO:0050789 regulation of biological process 14.42% (31/215) 1.07 4.5e-05 0.000399
GO:0010468 regulation of gene expression 12.56% (27/215) 1.2 3e-05 0.000405
GO:1903506 regulation of nucleic acid-templated transcription 12.56% (27/215) 1.23 2e-05 0.000415
GO:0006355 regulation of transcription, DNA-templated 12.56% (27/215) 1.23 2e-05 0.000415
GO:2000112 regulation of cellular macromolecule biosynthetic process 12.56% (27/215) 1.21 2.5e-05 0.000418
GO:0051252 regulation of RNA metabolic process 12.56% (27/215) 1.21 2.5e-05 0.000418
GO:2001141 regulation of RNA biosynthetic process 12.56% (27/215) 1.21 2.5e-05 0.000418
GO:0003700 DNA-binding transcription factor activity 9.3% (20/215) 1.65 4e-06 0.000418
GO:0050794 regulation of cellular process 14.42% (31/215) 1.11 2.7e-05 0.000422
GO:0009289 pilus 4.65% (10/215) 2.63 2e-06 0.000452
GO:0065007 biological regulation 14.42% (31/215) 1.05 6.3e-05 0.000539
GO:0030288 outer membrane-bounded periplasmic space 2.33% (5/215) 3.0 0.000212 0.001738
GO:0006820 anion transport 2.79% (6/215) 2.27 0.001119 0.008872
GO:0042597 periplasmic space 2.33% (5/215) 2.27 0.002944 0.022568
GO:0015698 inorganic anion transport 1.4% (3/215) 3.04 0.004138 0.030701
GO:0008509 anion transmembrane transporter activity 2.33% (5/215) 2.13 0.004593 0.03301
GO:0008410 CoA-transferase activity 1.4% (3/215) 2.85 0.006369 0.041853
GO:0022857 transmembrane transporter activity 11.16% (24/215) 0.77 0.006279 0.042476
GO:0005215 transporter activity 11.16% (24/215) 0.77 0.006279 0.042476
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_1 0.032 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_8 0.029 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_12 0.031 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.027 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_28 0.031 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_29 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_33 0.033 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_37 0.051 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_38 0.04 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_2 0.037 OrthoFinder Compare
Escherichia coli HCCA Cluster_5 0.035 OrthoFinder Compare
Escherichia coli HCCA Cluster_10 0.049 OrthoFinder Compare
Escherichia coli HCCA Cluster_28 0.031 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_10 0.03 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_1 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.046 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_7 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_19 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_21 0.073 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_30 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.06 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_43 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_45 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_46 0.071 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_51 0.048 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_21 0.037 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_5 0.053 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_9 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_11 0.049 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_12 0.046 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_15 0.044 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_18 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_19 0.046 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_27 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_35 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_48 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_4 0.035 OrthoFinder Compare
Salmonella enterica HCCA Cluster_5 0.052 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_7 0.08 OrthoFinder Compare
Salmonella enterica HCCA Cluster_11 0.05 OrthoFinder Compare
Salmonella enterica HCCA Cluster_13 0.044 OrthoFinder Compare
Salmonella enterica HCCA Cluster_25 0.04 OrthoFinder Compare
Salmonella enterica HCCA Cluster_26 0.027 OrthoFinder Compare
Salmonella enterica HCCA Cluster_33 0.055 OrthoFinder Compare
Salmonella enterica HCCA Cluster_36 0.069 OrthoFinder Compare
Salmonella enterica HCCA Cluster_41 0.032 OrthoFinder Compare
Salmonella enterica HCCA Cluster_46 0.053 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_4 0.034 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_7 0.031 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_8 0.027 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_5 0.027 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_11 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_16 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_19 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_21 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.039 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_25 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.066 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_33 0.033 OrthoFinder Compare
Sequences (215) (download table)

InterPro Domains

GO Terms

Family Terms