Coexpression cluster: Cluster_10 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006950 response to stress 8.2% (5/61) 3.96 1.3e-05 0.000599
GO:0033554 cellular response to stress 8.2% (5/61) 4.13 7e-06 0.000648
GO:0051716 cellular response to stimulus 8.2% (5/61) 4.02 1.1e-05 0.000656
GO:0006974 cellular response to DNA damage stimulus 8.2% (5/61) 4.2 6e-06 0.001035
GO:0050896 response to stimulus 8.2% (5/61) 3.55 5.7e-05 0.002061
GO:0006281 DNA repair 6.56% (4/61) 4.0 9.2e-05 0.002801
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 3.28% (2/61) 5.81 0.000412 0.010721
GO:0006139 nucleobase-containing compound metabolic process 14.75% (9/61) 1.83 0.000833 0.013787
GO:0003684 damaged DNA binding 3.28% (2/61) 5.4 0.000818 0.014894
GO:0006259 DNA metabolic process 9.84% (6/61) 2.47 0.000662 0.015055
GO:0044260 cellular macromolecule metabolic process 13.11% (8/61) 1.99 0.0008 0.016171
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 3.28% (2/61) 5.08 0.001354 0.018949
GO:0006260 DNA replication 4.92% (3/61) 3.73 0.001345 0.020406
GO:0046483 heterocycle metabolic process 14.75% (9/61) 1.58 0.002687 0.034937
GO:0006725 cellular aromatic compound metabolic process 14.75% (9/61) 1.55 0.003149 0.035822
GO:1901360 organic cyclic compound metabolic process 14.75% (9/61) 1.56 0.003068 0.037227
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Escherichia coli HCCA Cluster_11 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_19 0.043 OrthoFinder Compare
Escherichia coli HCCA Cluster_25 0.056 OrthoFinder Compare
Escherichia coli HCCA Cluster_41 0.043 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_14 0.036 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.034 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_7 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_17 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_32 0.058 OrthoFinder Compare
Salmonella enterica HCCA Cluster_1 0.15 OrthoFinder Compare
Salmonella enterica HCCA Cluster_21 0.037 OrthoFinder Compare
Salmonella enterica HCCA Cluster_28 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_21 0.034 OrthoFinder Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms