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- Expression Profiles
- Compare profiles
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- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
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| ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
|---|
| Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
|---|---|---|---|---|---|
| No enriched Clades found | |||||
| Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
|---|---|---|---|---|---|
| Clostridioides difficile | HCCA | Cluster_13 | 0.028 | OrthoFinder | Compare |
| Escherichia coli | HCCA | Cluster_10 | 0.034 | OrthoFinder | Compare |
| Klebsiella pneumoniae | HCCA | Cluster_3 | 0.028 | OrthoFinder | Compare |
| Mycobacterium tuberculosis | HCCA | Cluster_20 | 0.03 | OrthoFinder | Compare |
| Salmonella enterica | HCCA | Cluster_25 | 0.027 | OrthoFinder | Compare |
| Salmonella enterica | HCCA | Cluster_36 | 0.027 | OrthoFinder | Compare |