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Heatmap: Cluster_38 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16917 (gyrB)
 241.66 86.38 174.65 119.42 242.97 192.92 262.44 167.95 16.25 305.63 277.48 286.77 297.45 231.85 114.41 295.17 123.66 242.59 193.03 210.95 55.57 354.84 128.02 84.35 189.04 152.75 64.03 96.19 238.41
CCL16918 (gyrA)
 190.98 87.75 144.46 96.72 176.37 260.0 375.28 141.95 32.59 411.02 386.9 397.13 433.34 192.87 99.26 448.05 161.62 175.09 231.28 181.59 57.18 376.05 164.25 120.52 243.86 124.64 144.37 146.36 340.37
CCL16934 (BN171_1020001)
 79.43 40.4 4.79 5.48 3.43 49.52 80.26 19.48 117.86 182.83 151.27 31.44 111.82 65.67 37.39 164.13 36.92 38.95 51.7 73.35 46.85 19.59 106.11 38.68 44.33 33.24 6.18 0.0 47.13
CCL16976 (BN171_1030026)
 8.09 5.11 9.49 6.62 10.47 7.33 5.2 7.69 3.66 8.54 7.83 7.43 10.23 7.92 4.5 10.3 4.4 7.54 3.82 7.6 3.57 12.48 4.47 3.31 3.98 4.97 1.57 9.53 6.0
CCL17199 (murA)
 251.31 117.93 178.97 143.73 266.85 183.12 150.39 226.07 148.58 182.92 192.68 170.36 226.57 295.92 184.76 214.95 108.61 293.41 161.71 244.59 110.5 169.6 102.77 74.93 125.44 191.9 48.07 64.6 169.31
CCL17200 (spoIIC)
 89.92 24.47 75.87 40.49 116.23 64.13 128.98 66.54 18.58 130.98 111.09 97.53 147.04 132.99 42.31 131.29 44.56 97.54 87.86 113.9 31.92 82.03 61.4 38.37 79.24 73.34 32.29 37.83 98.22
CCL17279 (coaE)
 195.09 118.95 130.38 87.76 129.58 77.09 127.19 118.22 26.29 104.52 73.43 78.1 100.07 159.51 97.57 100.87 51.25 114.99 42.07 64.63 27.62 78.23 51.6 51.81 55.93 51.11 62.5 17.16 63.67
CCL17326 (ackA)
 363.84 193.39 310.95 230.45 503.03 655.4 742.71 421.88 684.26 819.24 826.67 779.47 850.89 249.97 221.04 1475.62 496.0 522.14 436.05 454.47 236.89 979.0 362.58 798.26 731.05 381.6 450.49 307.34 692.9
CCL17434 (BN171_1500010)
 2.98 4.89 2.93 7.12 2.59 1.3 2.22 0.88 1.5 3.14 1.66 1.89 5.13 2.01 4.79 4.71 2.04 1.45 1.38 1.96 4.21 1.17 1.79 1.27 1.72 1.07 0.85 6.3 0.97
CCL17591 (bceA)
 3.17 1.9 3.39 4.12 2.35 0.0 3.56 2.54 1.99 2.48 3.52 1.76 3.34 3.35 4.18 1.46 3.24 3.11 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.81 4.01
CCL17592 (BN171_160008)
 0.89 0.46 1.11 1.22 0.9 0.0 0.68 0.68 0.85 1.21 0.52 0.64 2.58 1.08 0.88 2.34 2.48 0.93 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.82 0.29
CCL17873 (BN171_1910001)
 64.7 58.62 72.98 66.95 116.29 19.84 64.58 152.66 47.97 112.18 87.14 91.13 80.73 54.08 81.84 136.97 68.41 131.58 22.68 26.31 21.08 13.6 20.31 96.64 79.83 20.8 7.64 0.0 108.85
CCL17886 (BN171_1920013)
 0.57 0.19 6.32 2.91 4.04 4.75 12.5 0.49 11.98 16.88 24.55 17.51 35.57 6.0 0.31 66.11 25.08 0.64 10.98 6.98 4.03 2.43 25.37 14.34 23.22 1.5 7.69 13.1 21.99
CCL17887 (BN171_1920014)
 14.79 1.09 33.6 48.82 41.73 11.33 4.73 4.14 20.99 20.87 16.65 18.98 38.65 43.13 6.26 62.0 31.26 26.57 15.08 33.18 14.54 8.81 27.87 24.52 36.36 18.56 8.95 12.16 20.89
CCL17888 (BN171_1920015)
 18.93 3.22 39.98 64.24 49.98 17.09 24.37 9.09 13.18 36.08 22.52 20.91 28.04 51.39 9.22 36.87 14.17 24.17 11.24 31.76 11.74 3.1 16.93 18.47 27.09 18.19 6.24 12.96 18.55
CCL18047 (scrB)
 2.21 1.96 3.0 6.05 3.12 2.31 3.84 1.64 2.21 7.75 6.09 2.42 5.07 2.69 6.88 9.33 4.06 1.25 2.33 2.43 2.11 3.35 3.3 1.98 1.85 1.39 0.64 3.45 4.31
CCL18068 (BN171_210004)
 80.44 37.52 75.48 37.74 71.82 51.26 55.79 46.14 24.95 93.76 84.19 90.95 99.86 76.54 36.26 194.81 37.6 72.71 72.85 61.37 21.3 35.55 62.49 47.45 61.22 28.46 11.91 50.25 72.43
CCL18091 (spsK)
 25.55 10.51 18.41 12.77 17.42 0.0 13.29 12.18 11.14 15.7 15.17 15.7 21.55 17.44 11.21 25.44 7.82 18.86 0.4 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 19.23 17.03
CCL18175 (BN171_2140017)
 111.76 64.64 103.3 60.45 90.02 0.0 32.78 167.01 57.31 59.2 59.34 73.32 66.36 90.57 53.04 78.26 79.18 109.67 1.14 0.0 1.32 0.0 0.0 0.0 0.0 0.0 0.0 0.26 52.98
CCL18239 (BN171_2180002)
 34.2 23.03 28.35 25.65 25.85 0.0 25.71 24.56 17.65 28.73 28.79 23.79 30.24 48.74 32.72 19.27 19.25 41.24 1.92 1.22 3.89 1.28 1.18 1.55 0.75 1.0 0.3 11.4 21.32
CCL18240 (BN171_2180003)
 45.01 32.82 29.75 20.93 32.76 0.79 47.74 41.84 26.64 75.92 59.57 52.28 34.95 54.32 41.18 24.9 27.4 57.26 3.02 1.65 3.25 3.34 0.82 1.58 1.71 1.06 0.65 13.81 53.8
CCL18377 (BN171_2260001)
 41.38 17.26 50.0 34.85 36.96 2.36 8.03 20.49 7.91 15.87 15.63 7.44 28.76 28.03 16.34 39.3 15.34 27.77 4.71 47.22 3.53 1.53 1.5 7.49 14.64 8.7 1.25 6.41 9.43
CCL18460 (BN171_2360002)
 10.26 1.32 13.88 6.26 13.72 17.67 32.21 3.67 73.66 41.87 45.49 33.44 70.44 10.28 2.1 110.11 32.34 7.38 15.69 13.9 4.69 3.46 34.18 36.36 48.5 6.72 5.96 15.49 46.14
CCL18461 (BN171_2360003)
 0.2 0.06 1.74 0.6 1.02 19.79 5.18 0.31 46.32 4.64 6.34 4.78 26.23 0.27 0.11 39.83 18.48 0.21 8.1 1.06 0.49 0.62 19.43 4.98 11.13 0.2 1.54 7.31 3.23
CCL18558 (BN171_2430004)
 4938.1 405.59 2845.82 270.92 6952.41 533.18 369.57 5079.11 81.67 2950.14 2946.41 3094.2 2418.28 3777.53 876.96 5621.26 453.1 5830.95 209.0 1668.05 356.1 155.87 264.64 137.62 454.59 2068.38 86.99 322.63 823.6
CCL18624 (sat)
 143.3 77.55 202.14 201.89 119.76 22.01 245.36 54.46 114.54 153.36 105.72 105.24 143.65 106.54 67.81 213.56 61.27 88.83 48.77 78.96 58.39 35.2 48.34 66.1 51.75 20.47 24.29 113.68 73.2
CCL18733 (BN171_260002)
 17.11 10.51 23.82 28.83 37.09 19.37 23.3 24.45 14.24 51.15 35.91 35.65 68.37 17.0 13.2 80.89 52.15 38.16 32.82 14.29 8.25 26.9 36.05 54.06 57.54 14.36 10.19 0.0 33.51
CCL18734 (BN171_260003)
 9.09 3.31 14.79 22.72 24.18 7.83 18.49 4.16 10.3 42.23 30.04 27.77 63.4 9.28 7.92 73.47 26.45 22.25 21.09 9.22 5.53 11.34 27.72 40.28 46.28 8.89 7.99 0.0 26.24
CCL18735 (BN171_260004)
 19.56 11.09 28.62 30.19 51.47 21.29 31.65 30.87 18.69 41.78 41.92 39.54 65.38 21.28 21.75 71.76 55.59 54.91 25.87 11.6 5.99 39.11 23.94 25.46 35.96 16.06 6.61 0.0 33.08
CCL18737 (BN171_260006)
 14.89 4.18 19.54 12.28 31.3 9.33 28.17 14.77 25.05 43.42 43.76 39.88 50.56 17.05 9.62 62.59 35.63 34.86 31.4 14.67 6.66 25.29 27.22 23.17 31.55 10.94 5.11 0.0 26.01
CCL18738 (BN171_260007)
 27.43 9.74 39.31 32.17 56.58 15.38 28.79 31.15 61.62 32.52 32.04 26.65 49.56 34.49 22.95 59.9 43.25 53.88 24.42 27.58 13.54 26.76 23.04 22.96 33.33 22.62 5.43 0.0 22.61
CCL18806 (BN171_2650003)
 234.88 59.0 317.59 80.55 200.51 145.97 125.26 230.38 21.89 131.81 114.48 125.62 196.57 194.91 56.41 494.28 69.59 185.2 53.72 420.15 85.8 90.21 56.4 77.77 159.39 252.0 54.45 90.63 109.8
CCL18816 (BN171_2660005)
 93.82 31.88 72.71 50.97 81.03 83.68 54.24 46.41 67.88 65.43 60.59 62.06 109.41 88.38 37.52 161.17 56.88 94.46 50.25 124.48 27.62 139.63 70.79 53.16 144.99 67.51 30.26 25.3 44.19
CCL18817 (BN171_2660006)
 49.9 15.91 35.47 27.76 42.35 50.66 54.55 22.28 37.06 65.54 67.87 64.31 120.79 40.46 18.56 191.06 47.34 53.21 43.49 57.03 14.56 157.07 70.16 55.46 143.96 31.51 56.75 28.26 48.59
CCL18818 (BN171_2660007)
 60.23 21.0 47.95 37.57 54.94 83.82 70.84 27.1 31.59 95.94 87.42 91.89 128.54 70.69 22.77 198.82 58.72 58.46 53.18 78.93 18.81 130.68 83.06 56.99 131.11 39.57 110.73 64.64 71.24
CCL18894 (BN171_2700017)
 30.96 9.22 33.12 39.13 24.99 8.38 15.8 14.87 32.46 19.43 20.0 15.19 22.83 24.93 10.92 34.77 16.25 18.59 15.34 23.13 21.33 29.73 11.93 21.67 28.72 16.18 6.98 1.79 13.3
CCL18895 (BN171_2700018)
 36.65 16.24 27.66 41.58 32.3 15.51 23.51 23.38 27.65 25.19 19.68 20.76 24.72 22.08 14.47 36.79 12.82 24.05 15.89 25.55 16.35 32.22 16.05 16.65 21.53 16.62 5.04 0.0 20.94
CCL19078 (BN171_2870008)
 11.12 14.85 13.78 22.74 12.96 1.38 42.22 5.84 14.09 24.05 12.09 19.73 21.18 14.55 18.08 18.36 6.24 11.97 2.84 2.51 3.27 1.7 8.03 2.65 2.32 1.78 2.6 6.94 10.49
CCL19106 (BN171_2870036)
 1621.66 468.54 1383.95 369.22 2129.64 17.01 639.49 1814.54 342.96 1180.74 1569.43 1463.84 2060.57 1643.81 634.69 4329.05 1573.57 3044.64 52.68 26.59 56.31 16.15 18.56 12.62 16.63 20.49 10.83 1204.92 1255.06
CCL19146 (pfo)
 1384.93 705.89 1514.59 824.56 1579.47 2311.61 5668.75 1327.44 1957.98 5404.66 4043.76 4644.87 4400.59 766.79 798.11 7249.54 2391.53 1493.99 3075.81 2397.23 1035.44 7807.34 2380.95 3225.64 6501.06 1650.55 3675.71 1607.52 3713.36
CCL19290 (cwp)
 5.59 3.47 7.45 8.07 8.95 14.54 4.71 7.03 15.38 4.48 6.31 4.86 16.38 5.5 6.07 26.81 15.53 8.07 6.65 9.74 4.7 10.24 13.13 9.38 11.24 9.79 2.37 10.51 4.71
CCL19317 (BN171_3020029)
 8.13 2.11 10.34 6.78 10.2 0.19 6.15 3.35 3.5 5.96 5.9 3.71 11.7 15.89 4.16 21.85 3.06 13.48 1.04 0.34 0.99 0.3 1.46 0.97 1.12 0.08 0.29 8.99 4.03
CCL19381 (BN171_3080028)
 2.01 1.13 2.93 2.22 2.88 3.71 5.49 1.8 4.58 5.36 6.76 7.89 10.06 3.86 3.43 14.94 4.36 3.49 4.61 1.74 1.48 3.2 7.72 2.7 5.49 1.0 1.48 0.0 6.26
CCL19547 (BN171_3250007)
 153.56 72.07 117.52 41.81 109.68 75.58 72.75 199.57 90.88 72.54 64.28 61.4 132.72 99.15 54.58 121.48 64.0 123.98 82.73 126.18 32.27 26.4 90.23 96.08 82.23 102.56 16.84 65.98 54.91
CCL19548 (BN171_3250008)
 7.55 2.98 11.25 5.41 7.51 2.53 8.84 6.06 11.6 7.1 3.38 4.69 14.82 16.24 3.77 18.0 8.35 4.36 7.66 19.58 8.68 2.91 8.29 5.18 4.75 15.15 3.39 7.45 3.29
CCL19640 (bceA)
 3.81 0.96 2.45 1.98 1.18 0.0 5.82 0.91 4.9 4.49 4.4 4.24 5.51 2.72 1.17 3.6 2.05 1.81 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.02 2.05
CCL19688 (BN171_340005)
 93.67 51.41 79.77 55.71 92.09 64.9 63.12 66.48 62.47 86.05 79.53 80.06 91.02 99.45 50.35 122.69 43.84 77.88 69.4 108.05 36.28 20.41 42.82 43.12 50.81 76.28 6.41 23.01 82.92
CCL19689 (rluA)
 45.3 25.9 44.17 27.91 40.77 48.55 51.4 30.08 16.05 53.79 50.13 47.77 60.86 48.24 28.84 78.94 28.18 39.4 42.91 37.9 19.51 10.57 27.67 31.53 38.34 21.74 4.61 16.07 42.24
CCL19690 (BN171_340007)
 40.16 27.71 36.44 27.11 45.98 63.74 70.58 31.7 13.86 84.88 73.63 86.55 88.86 35.18 36.48 128.59 37.54 47.82 53.55 34.99 14.85 39.86 35.87 46.44 63.01 30.21 12.72 14.67 58.9
CCL19747 (BN171_3440022)
 9.69 4.92 10.29 12.69 14.63 1.04 7.24 12.98 2.85 5.08 5.2 8.52 9.72 10.73 6.04 17.19 8.89 16.23 3.07 5.83 10.68 3.47 2.54 1.18 1.94 4.65 2.25 0.0 2.98
CCL19768 (BN171_3470006)
 73.43 28.24 112.63 85.3 249.9 79.03 105.54 163.49 61.14 135.31 127.63 115.46 158.17 157.18 87.09 324.0 134.25 238.15 118.15 262.61 66.39 82.13 85.81 49.26 213.57 227.95 29.05 134.83 105.92
CCL19804 (BN171_3490007)
 14.33 7.38 17.03 12.82 16.62 18.54 9.35 8.76 5.13 12.11 15.16 14.12 14.85 16.24 10.15 23.36 8.07 11.12 10.95 18.6 8.62 4.14 9.03 7.35 10.74 12.9 1.12 17.93 13.56
CCL19901 (BN171_3590022)
 7.2 4.36 12.05 12.22 11.99 2.75 8.13 6.65 8.13 8.98 8.62 6.91 9.66 9.18 5.93 14.35 6.06 8.4 4.7 4.66 2.98 0.39 4.29 2.17 2.16 1.72 0.59 3.49 9.67
CCL19971 (pth)
 28.08 9.9 46.63 31.61 65.39 58.83 51.5 49.62 10.15 56.76 42.74 53.08 52.02 47.92 14.51 83.5 28.22 54.23 39.56 50.77 10.41 63.57 28.66 15.32 29.02 49.63 7.15 22.58 39.92
CCL20028 (BN171_3670011)
 188.81 70.64 130.61 68.29 246.19 79.3 62.4 334.97 10.03 96.13 123.1 108.67 155.09 162.76 56.77 408.28 47.1 226.69 114.71 266.8 61.94 15.1 108.67 77.4 154.12 255.62 7.85 139.26 99.14
CCL20173 (BN171_3740002)
 6.63 11.68 6.63 6.99 20.49 0.0 3.92 23.73 3.2 4.14 4.98 5.9 6.9 6.39 4.22 13.93 4.23 13.12 0.12 0.0 0.49 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.8
CCL20179 (BN171_3740008)
 16.16 25.0 19.55 29.83 42.06 0.0 14.69 25.19 19.1 22.73 13.27 22.98 21.38 13.76 7.49 42.23 8.04 14.74 0.26 0.0 0.59 0.0 0.0 0.0 0.0 0.0 0.0 0.0 14.81
CCL20219 (spaR)
 22.58 13.63 23.25 18.84 51.4 36.09 47.6 46.92 6.07 70.26 57.92 67.08 52.37 23.88 23.55 81.38 32.77 62.24 44.88 28.67 8.95 52.77 44.21 41.44 48.56 41.82 14.53 24.98 47.09
CCL20232 (BN171_3830002)
 53.96 136.07 44.99 102.02 69.17 0.0 62.63 85.96 60.75 90.17 82.43 78.19 50.79 43.07 193.18 74.29 75.52 130.04 1.72 0.0 3.56 0.0 0.0 0.0 0.0 0.0 0.0 0.0 78.65
CCL20525 (ispD)
 85.57 20.75 51.89 20.3 48.26 62.46 49.48 47.47 14.2 53.17 60.09 57.66 53.69 101.19 22.93 69.34 28.01 49.7 44.26 71.16 11.0 21.69 30.5 22.59 50.69 40.48 18.78 28.22 54.72
CCL20526 (ispF)
 181.11 40.73 130.78 48.73 116.09 81.88 94.33 92.36 13.13 88.96 99.05 80.16 81.3 224.76 50.41 111.77 46.77 109.77 84.28 171.81 26.57 20.96 58.72 46.13 111.55 106.16 53.16 69.74 103.19
CCL20540 (BN171_620001)
 33.36 14.99 25.3 15.86 34.23 31.23 57.46 30.47 29.28 88.94 70.55 62.0 76.57 20.65 22.7 104.35 49.6 43.47 64.36 12.61 9.6 50.45 78.27 45.14 45.04 10.22 5.6 24.63 51.09
CCL20598 (rpsI)
 4435.19 2704.1 3493.88 2972.17 6986.32 3233.08 2259.48 7065.39 424.24 3315.12 3853.91 4039.81 2747.19 6669.36 3871.59 5844.86 2968.16 7149.23 2513.32 6182.77 1961.78 2025.25 1993.4 2428.35 3776.97 6974.52 688.49 3606.24 4375.37
CCL20606 (BN171_720001)
 10.31 3.7 12.6 13.86 19.59 16.65 12.54 8.8 3.89 14.52 14.96 15.4 13.86 8.49 5.16 12.87 10.69 16.27 14.26 9.66 3.29 10.4 12.54 13.76 15.43 9.82 5.3 0.0 8.72
CCL20607 (BN171_720002)
 16.07 4.52 20.92 21.17 23.01 25.88 46.62 3.58 22.34 50.72 33.93 37.52 30.68 9.99 7.3 24.49 17.66 15.34 30.12 11.19 8.6 20.78 37.76 28.5 27.73 7.38 15.24 0.0 37.37
CCL20673 (BN171_880009)
 32.94 22.23 25.32 29.3 37.74 22.95 51.42 49.65 36.06 58.48 51.66 54.79 48.02 22.29 28.26 69.59 31.76 49.52 35.22 21.96 17.7 21.78 50.43 32.23 34.13 22.85 12.19 0.0 42.53
CCL20691 (BN171_930002)
 22.2 6.01 22.43 13.54 28.18 33.8 24.38 7.02 10.82 43.91 42.84 29.19 41.38 15.95 10.99 69.11 29.21 20.41 15.39 33.24 13.4 3.24 13.67 14.31 21.77 20.99 3.86 12.38 17.66
CCL20707 (mutS)
 88.68 22.85 52.7 24.22 77.93 64.77 43.51 66.67 13.11 55.14 55.36 54.59 79.84 69.4 24.84 89.0 36.74 77.12 54.47 65.44 16.07 62.19 57.8 25.42 53.8 48.82 14.31 30.71 55.05
CCL20708 (BN171_950009)
 101.21 25.75 67.51 29.0 88.42 71.05 50.67 91.11 4.71 56.29 41.04 53.98 67.62 76.43 31.59 56.17 39.56 85.61 62.63 108.18 32.53 91.04 59.48 31.35 53.07 84.69 41.54 32.83 52.43
CCL20709 (argS)
 199.46 63.14 173.29 81.65 193.11 262.84 172.67 159.09 40.19 229.77 222.14 227.37 264.91 182.09 79.47 367.24 160.49 221.18 186.15 248.69 86.04 222.11 240.84 130.15 225.62 164.18 43.52 138.82 206.93
CCL20745 (BN171_970004)
 10.84 14.42 8.83 13.58 11.09 39.08 93.5 13.94 53.25 34.66 33.69 24.68 43.27 8.48 13.01 71.37 20.96 14.01 23.8 20.78 28.92 21.09 35.07 38.57 40.93 16.65 16.23 28.0 24.26

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)