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Heatmap: Cluster_24 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
10P129H1,ModA15 OFF
10P129H1,ModA15 ON
10P129H1,ModA15ON
1209,ModA9 OFF
1209,ModA9 ON
1209,ModA9ON
477,ModA5 OFF
477,ModA5 OFF
477,ModA5 ON
84P36H1,ModA18 OFF
84P36H1,ModA18 OFF
84P36H1,ModA18 ON
84P36H1,ModA18ON
86-028NP,nasopharynx
86-028NP,rpsL,nasopharynx
86-028NP,rspL/fur-,nasopharynx
86-028NP,rspL/pT-fur,nasopharynx
C486,ModA4 OFF
C486,ModA4 ON
C486,ModA4ON
GE47,WT,sBHI,37C
GE47,WT,sBHI,42C
R2866,ModA10 OFF
R2866,ModA10 OFF
R2866,ModA10 OFF
R2866,ModA10 ON
R2866,ModA10ON
RdKW20,BHI
RdKW20,HI0628-,mid-log,50µM beclomethasone
RdKW20,HI0628-,mid-log,DMSO
RdKW20,HI0659-,MIV
RdKW20,HI0659-,MM
RdKW20,HI0659-/HI0660-,MIV
RdKW20,HI0660-,MIV
RdKW20,MIV
RdKW20,WT
RdKW20,WT,mid-log,50µM beclomethasone
RdKW20,WT,mid-log,DMSO
RdKW20,beclomethasone
RdKW20,comN-,MIV
RdKW20,crp-,BHI
RdKW20,crp-,MIV
RdKW20,hfq-,MIV
RdKW20,murE749,BHI
RdKW20,prednisolone
RdKW20,rpoD753,BHI
RdKW20,sxy-,BHI
RdKW20,sxy-,MIV
RdKW20,sxy-1,BHI
bronchoalveolar lavage
nasopharynx
EDJ90017 (CGSHi22421_09606)
 457.24 196.33 194.24 0.1 0.2 0.22 165.09 167.67 155.32 294.5 290.16 400.25 385.48 0.0 70.51 51.66 50.39 161.63 234.13 244.61 95.5 271.97 842.2 846.75 896.59 869.61 839.99 84.59 72.99 78.48 129.87 95.68 94.0 108.38 169.06 88.15 257.25 206.34 59.15 93.7 69.0 67.76 94.31 96.47 131.66 117.87 72.27 149.06 84.57 131.54 146.86
EDJ90018 (CGSHi22421_09611)
 349.25 149.34 147.11 0.0 0.02 0.0 180.69 187.15 160.35 263.56 271.77 370.71 353.84 0.0 78.41 61.55 71.47 153.31 284.6 277.62 52.92 157.14 699.02 618.78 584.65 673.43 671.47 116.7 67.18 61.56 159.24 131.91 123.31 130.4 244.5 111.02 284.36 201.39 43.55 122.33 99.11 79.06 121.72 143.91 143.38 145.69 93.13 178.7 117.96 143.05 164.22
EDJ90019 (CGSHi22421_09616)
 321.46 151.47 153.68 0.0 0.0 0.0 322.01 322.01 264.86 445.08 411.07 494.84 517.8 0.0 87.52 65.9 86.61 182.94 230.85 240.52 75.1 204.55 711.78 596.5 504.05 775.02 761.58 137.42 130.66 94.72 189.97 169.97 157.89 151.21 299.33 195.99 420.33 229.83 44.47 151.62 111.04 69.22 137.01 159.63 203.33 169.34 104.46 201.41 129.16 209.19 241.41

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)