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Heatmap: Cluster_33 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17165 (BN171_1330026)
 1.91 1.63 3.21 2.3 2.34 1.68 5.28 2.24 0.8 2.11 2.7 3.01 2.82 1.71 1.6 3.92 1.52 1.58 2.05 1.47 0.59 4.97 3.69 1.28 1.01 1.06 1.53 2.23 2.58
CCL17178 (BN171_1330039)
 5.62 3.38 5.23 4.71 4.52 2.8 9.39 3.98 2.12 6.36 5.21 7.64 6.79 4.29 2.87 4.85 1.89 4.03 2.81 3.92 4.65 10.95 5.83 3.16 1.81 1.81 1.51 3.62 3.57
CCL17195 (BN171_1380006)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 0.0
CCL17202 (spoIIID)
 8.26 10.21 21.77 38.72 35.76 3.41 248.1 12.83 0.47 21.83 4.28 0.77 60.66 17.04 16.27 7.54 2.73 14.79 2.42 13.01 11.44 596.84 0.6 0.89 1.26 11.13 57.06 11.34 0.0
CCL17304 (BN171_1430031)
 2.36 0.8 10.54 15.32 7.66 14.42 3.34 0.79 8.76 8.82 6.76 8.38 9.21 4.55 1.3 4.42 5.32 1.47 6.49 3.74 4.68 5.1 4.47 1.43 4.7 3.13 0.62 22.67 2.35
CCL17305 (BN171_1430032)
 10.0 5.11 25.03 32.35 24.51 9.84 7.67 4.83 9.24 6.86 7.32 7.93 12.78 8.34 4.65 11.46 6.19 7.31 7.94 13.58 13.38 3.86 9.94 4.74 7.72 14.59 3.96 16.57 7.43
CCL17437 (BN171_1500013)
 0.36 0.0 0.57 1.0 0.38 1.1 3.99 0.2 0.0 3.4 4.61 1.64 1.82 0.68 0.28 0.0 0.62 0.41 0.61 0.0 0.3 0.0 0.86 0.71 0.42 0.11 1.21 4.17 2.81
CCL17693 (BN171_1680008)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.36 0.0 0.0 0.0 0.0 0.0 0.0 1.73 1.58 0.0 1.35 20.29 0.0
CCL17902 (BN171_1930014)
 89.34 33.29 51.62 37.94 28.98 30.78 25.02 21.38 21.76 26.66 50.1 36.85 72.48 55.97 33.68 105.02 36.09 31.59 31.29 43.88 42.98 131.09 29.68 33.43 75.62 19.36 30.25 75.6 40.91
CCL18149 (BN171_2130006)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.64 0.0 0.0 0.0 0.7 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.91 0.0 2.45 24.65 0.0
CCL18155 (BN171_2130012)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.7 1.68 0.0 0.0 0.24 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.95 6.97 0.0
CCL18221 (BN171_2170008)
 3.79 8.7 13.18 22.92 9.43 2.85 25.11 6.09 5.5 19.8 27.21 23.1 8.28 3.02 10.3 6.26 5.55 5.89 8.14 5.6 6.67 21.85 7.53 9.18 5.67 2.87 5.19 18.64 21.13
CCL18363 (argF)
 1.68 3.24 2.17 5.29 3.36 0.82 8.6 1.88 1.47 7.65 3.68 5.76 4.08 1.2 2.87 2.72 2.22 1.56 1.7 1.11 1.44 1.27 0.92 0.94 0.67 0.62 2.16 2.05 2.36
CCL18364 (argM)
 0.77 1.48 1.26 2.26 1.13 0.51 1.39 0.59 0.96 2.81 2.48 2.44 3.16 0.3 1.38 2.12 1.2 0.63 1.35 0.39 0.38 0.48 1.04 0.73 0.3 0.13 1.14 1.49 1.76
CCL18446 (BN171_2340006)
 0.65 1.64 0.97 2.65 1.08 0.39 3.98 0.48 0.68 2.57 3.49 2.57 1.87 0.43 2.22 1.9 0.72 0.93 1.85 0.73 2.03 2.87 0.96 1.03 0.64 0.28 1.01 5.8 3.52
CCL18503 (bioB)
 8.22 7.01 15.01 20.74 13.55 3.19 9.93 7.92 2.87 8.42 6.46 7.01 8.02 6.45 10.32 8.62 2.5 9.7 7.21 12.28 18.51 6.37 5.05 3.28 3.51 11.99 1.12 10.29 5.26
CCL18535 (BN171_2420002)
 1.34 1.9 7.55 13.94 6.95 2.16 4.93 1.55 0.57 1.29 1.64 1.37 6.47 2.68 4.85 2.72 1.35 2.72 2.2 3.49 5.15 4.65 8.87 0.43 1.65 1.71 1.32 8.8 1.19
CCL18594 (BN171_2440035)
 18.94 9.99 28.46 47.46 30.94 9.29 16.81 9.49 11.87 25.26 17.79 16.7 26.24 22.05 11.8 29.12 13.2 15.75 17.07 25.78 15.5 31.39 16.17 13.37 12.24 11.98 6.45 35.05 11.41
CCL18602 (BN171_2440043)
 85.46 20.43 102.32 131.82 120.02 52.57 40.84 53.81 26.78 31.63 37.44 39.24 89.81 83.5 31.18 197.41 30.17 78.59 41.68 65.19 42.98 151.03 48.78 19.28 62.14 58.46 1.63 108.35 36.63
CCL18610 (BN171_2470004)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.47 0.0
CCL18627 (BN171_2480002)
 3.01 0.66 2.42 1.76 1.14 0.87 4.78 1.18 0.88 6.1 4.58 4.43 4.64 2.69 0.62 3.81 1.5 1.27 1.53 1.54 0.72 6.92 4.43 1.1 1.69 1.03 2.37 3.63 5.41
CCL18651 (BN171_2480026)
 91.21 247.86 162.22 448.16 146.37 65.02 243.78 57.98 56.77 144.53 87.05 232.29 115.91 81.98 125.82 169.92 32.37 98.15 58.81 76.1 157.88 140.54 35.56 17.15 38.68 63.82 81.6 244.4 61.49
CCL18677 (BN171_2480052)
 1.14 2.66 0.94 2.96 0.91 0.25 6.22 1.09 1.15 6.46 3.8 4.99 2.15 0.49 1.77 1.75 1.52 1.3 2.38 0.59 1.95 2.06 5.03 3.24 1.24 0.37 2.82 3.43 5.26
CCL18678 (BN171_2480053)
 3.97 6.84 2.83 7.78 4.3 1.18 11.47 4.0 1.02 6.74 5.58 4.93 2.87 1.52 3.88 1.14 2.83 3.36 2.65 4.27 7.95 4.59 1.55 1.29 2.35 3.31 2.08 10.11 7.88
CCL18689 (BN171_250002)
 48.09 51.64 323.91 793.96 443.45 102.67 284.79 30.16 704.84 268.58 230.63 282.07 149.65 43.53 65.6 266.06 232.71 75.34 79.82 26.54 37.08 18.3 78.6 40.71 23.44 22.74 37.03 733.69 192.07
CCL18834 (BN171_2680003)
 1.6 2.92 2.09 5.61 2.43 0.77 11.53 0.8 2.13 1.43 1.49 1.41 2.27 0.75 1.98 1.41 1.05 1.32 3.0 1.36 4.65 3.06 7.87 4.04 1.55 0.89 2.98 5.14 1.06
CCL18835 (BN171_2680004)
 2.26 4.37 2.21 7.78 2.66 0.82 12.31 1.05 3.06 3.04 1.5 2.1 3.19 0.91 1.94 1.67 0.69 0.98 1.31 1.8 5.75 5.2 0.69 0.96 0.61 1.37 1.97 4.03 0.61
CCL18836 (ptb)
 3.58 7.28 5.06 17.02 6.62 0.55 11.82 2.39 3.04 3.25 1.13 1.8 5.84 2.05 4.31 3.35 0.97 1.67 1.08 2.55 9.59 7.56 0.45 0.96 0.43 2.6 1.49 3.18 0.74
CCL18837 (buk)
 4.86 10.76 8.95 25.9 12.36 0.82 13.22 3.32 5.11 3.31 1.12 1.67 5.15 2.66 7.0 3.58 5.03 3.42 1.6 3.87 10.91 14.21 0.49 0.83 0.34 4.26 1.56 3.33 0.71
CCL18838 (BN171_2680007)
 2.12 3.81 3.96 7.21 3.09 0.61 20.69 1.59 8.9 4.96 3.13 2.82 6.67 1.22 2.46 2.37 1.0 1.1 2.12 3.06 8.52 14.56 2.88 2.27 0.54 2.51 6.13 3.2 2.1
CCL18839 (BN171_2680008)
 3.15 5.88 3.71 7.78 3.51 1.09 18.21 1.89 7.73 3.9 3.29 1.58 6.02 0.84 4.24 1.64 1.3 2.79 2.92 2.29 6.81 37.94 2.97 2.31 0.54 1.91 6.85 2.85 0.59
CCL18840 (BN171_2680009)
 2.16 3.95 2.1 5.21 2.9 0.89 18.2 1.68 6.95 3.34 2.21 2.18 6.67 0.99 3.32 2.72 1.59 1.39 2.57 1.93 4.61 44.8 2.06 1.58 0.57 1.69 8.91 3.04 2.22
CCL19032 (BN171_2820002)
 4.72 6.47 7.02 10.06 9.33 11.54 14.43 7.09 6.31 10.63 12.2 12.16 8.09 3.28 7.1 8.95 5.21 7.03 6.63 9.62 9.19 7.37 8.91 5.21 5.57 11.34 3.75 6.66 8.51
CCL19172 (BN171_2910007)
 2.24 4.49 2.58 6.71 2.67 0.52 2.24 1.46 2.52 3.99 3.83 4.87 2.43 1.3 2.96 2.27 1.3 1.6 2.01 1.61 2.5 1.31 5.51 1.86 1.01 0.85 1.64 2.43 2.31
CCL19173 (aroE)
 1.95 4.27 2.2 6.57 1.56 0.28 3.71 1.07 2.56 7.6 4.52 3.72 2.31 1.58 2.67 2.87 0.84 1.15 1.79 1.37 2.6 4.02 5.0 0.97 0.69 0.79 0.86 2.05 1.85
CCL19200 (BN171_2950002)
 1.88 3.6 1.56 3.65 1.63 2.11 11.05 1.5 1.42 14.45 12.96 13.32 4.94 1.82 3.78 5.56 2.97 1.7 5.19 3.04 5.99 3.16 5.43 4.78 3.74 1.64 3.54 12.25 7.73
CCL19201 (BN171_2950003)
 4.69 4.66 2.56 8.27 2.95 0.4 19.01 1.81 2.16 16.96 11.44 12.68 5.96 2.83 5.96 4.36 3.68 2.93 5.5 2.71 7.24 3.68 6.08 6.33 3.82 1.41 3.14 14.84 7.0
CCL19331 (BN171_3050005)
 0.43 0.36 0.67 0.83 0.74 0.26 7.99 0.15 0.4 0.84 1.33 2.77 1.43 0.03 0.52 2.25 0.81 0.42 2.09 0.15 0.38 0.43 4.63 2.68 0.31 0.07 1.98 1.71 2.53
CCL19333 (BN171_3050007)
 1.72 1.48 2.87 5.18 1.77 1.33 7.17 0.48 3.27 1.94 1.34 1.51 3.13 1.77 1.42 3.89 0.93 0.89 1.49 2.67 4.16 0.22 1.51 1.04 1.38 1.16 1.14 1.29 1.1
CCL19452 (BN171_3150015)
 2.84 0.7 1.97 1.45 2.92 5.48 56.33 1.87 5.01 35.53 48.98 21.85 6.37 3.73 1.41 6.15 16.34 5.47 16.05 3.82 8.43 3.64 11.69 2.34 9.18 4.41 1.18 52.91 42.8
CCL19481 (murQ)
 3.32 4.1 6.21 14.13 8.5 4.02 6.4 3.23 1.8 5.2 4.5 5.92 5.55 2.34 3.68 4.94 2.23 3.38 4.37 3.65 2.24 5.47 3.91 1.52 1.42 2.66 0.78 5.34 3.15
CCL19482 (BN171_3180006)
 0.97 1.42 2.42 6.32 2.19 0.72 5.75 0.77 0.75 4.26 2.23 2.83 3.41 0.98 1.19 1.53 0.57 0.85 1.57 0.7 0.39 0.42 1.02 0.24 0.46 0.49 0.3 2.13 0.34
CCL19492 (BN171_3180016)
 2.42 5.95 2.26 3.89 3.08 1.51 7.58 1.81 0.95 7.27 5.07 5.66 3.65 2.9 5.36 5.39 2.38 4.48 3.38 3.62 7.38 0.35 3.38 1.75 2.32 2.56 0.72 4.15 9.9
CCL19494 (BN171_3180018)
 1.24 4.01 0.92 2.87 1.36 0.7 8.32 1.6 1.42 7.47 6.69 4.99 2.75 1.14 4.06 3.68 1.58 1.8 2.32 0.83 4.4 2.13 2.15 1.47 1.3 1.01 0.47 4.49 7.14
CCL19495 (BN171_3180019)
 0.29 1.14 0.26 1.28 0.28 0.06 3.1 0.3 0.26 4.4 3.09 1.5 1.34 0.23 1.44 2.25 0.38 0.52 0.8 0.17 2.13 0.7 0.27 1.44 0.56 0.16 0.18 2.85 2.32
CCL19557 (BN171_3260008)
 0.99 1.65 1.74 4.12 1.94 1.7 21.39 1.28 1.0 6.45 3.03 4.42 5.27 0.71 2.67 5.15 2.09 1.69 4.46 1.47 5.92 18.38 4.67 1.84 1.79 1.47 7.21 0.61 3.41
CCL19558 (BN171_3260009)
 0.87 2.04 1.43 4.52 2.07 0.56 12.35 0.99 0.81 3.97 2.1 2.56 3.39 0.57 2.11 4.02 1.36 1.55 2.44 1.33 5.42 16.09 2.07 0.93 0.87 1.57 3.44 5.18 2.69
CCL19894 (BN171_3590015)
 2.64 2.33 3.99 6.85 6.0 11.13 1.65 2.37 4.9 0.45 1.16 4.95 7.61 1.81 3.1 8.92 4.96 4.47 6.38 4.46 10.1 6.97 6.8 6.09 9.32 4.21 1.87 7.62 0.75
CCL19895 (BN171_3590016)
 2.75 2.51 4.69 7.99 6.17 8.78 0.0 3.42 1.85 0.61 2.17 1.31 8.28 2.74 2.93 12.16 2.97 3.46 4.11 4.17 5.75 4.46 4.37 3.2 6.25 4.3 0.7 10.51 0.96
CCL19896 (BN171_3590017)
 1.97 2.18 3.17 4.24 4.56 6.35 2.94 2.48 2.38 1.51 3.19 2.46 4.86 1.36 2.16 7.97 1.83 2.62 3.18 2.61 3.56 2.6 1.93 1.24 2.89 2.72 0.41 4.04 0.97
CCL20248 (BN171_390002)
 0.3 0.3 0.29 0.66 0.48 0.19 0.35 0.28 0.16 1.2 0.34 0.87 1.44 0.36 0.44 1.94 0.55 0.21 0.88 0.46 0.7 0.81 0.69 0.56 0.59 0.28 0.13 1.01 1.09
CCL20604 (BN171_710002)
 1.46 0.73 1.16 2.97 1.85 0.36 0.84 0.83 0.25 2.95 1.93 2.46 2.73 1.14 0.85 4.73 1.26 1.46 1.21 0.5 0.35 1.23 0.81 0.33 1.89 0.7 0.29 1.7 1.05
CCL20605 (BN171_710003)
 6.4 2.96 14.84 11.63 19.17 12.83 23.38 7.3 4.47 17.43 17.59 18.02 13.17 9.42 3.86 12.08 7.75 13.35 7.57 9.19 3.82 7.09 5.13 9.08 8.07 12.61 3.48 24.87 23.48
CCL20657 (BN171_840001)
 1.0 0.56 34.98 27.94 11.53 2.87 11.78 0.24 2.06 11.36 9.88 9.47 13.0 3.47 1.6 14.34 4.42 1.39 3.45 2.58 6.4 17.5 3.49 1.53 4.05 1.21 7.57 22.96 5.37

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)