Heatmap: Cluster_61 (HCCA)

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Gene	strain_5001420,control,fromUrine	strain_5001420,fromUrine	ch1034,13h_old_biofilm,biofilm_dispersed	ch1034,13h_old_biofilm,sessile	ch1034,7h_old_biofilm,sessile	ch1034,Log,planktonic	ch1034,Stationary,planktonic	control,fromNasalSwab,fromSwine	dmc1097	dmc1097,control,fromBlood	dmc1097,fromBlood	ekp16,fromSputum	eugenol,fromNasalSwab,fromSwine	fromBlood	fromHospitalPatients	fromRectalSwab	fromUrine	je01	k26,mero_susceptible,fromHospitalPatients	k56,mero_resistant,fromHospitalPatients	kctc2242	kp4,FeLimited,fromRespiratoryTract	kpr1,+CTX	kpr1,+gent	kpr1,+mero	kpr1,+TMP/SMX	kpr1,control	kpr2,+CTX	kpr2,+gent	kpr2,+mero	kpr2,+TMP/SMX	kpr2,control	kps1,+CTX	kps1,+gent	kps1,+mero	kps1,+TMP/SMX	kps1,control	kps2,+CTX	kps2,+gent	kps2,+mero	kps2,+TMP/SMX	kps2,control	mrsn 1319	ms6671	njst258-1,FeLimited,fromUrine	njst258-1,fromUrine	rb011,+mero,mero_resistant	rb011,control,mero_resistant	rb012,+gent,gent_resistant	rb012,control,gent_resistant	rb013,+cip,cip_resistant	rb013,control,cip_resistant	rb039,+cip,cip_resistant	rb039,+mero,mero_susceptible	rb039,control,cip_resistant	rb039,control,mero_susceptible	rb040,+cip,cip_susceptible	rb040,+gent,gent_susceptible	rb040,control,cip_susceptible	rb040,control,gent_susceptible	rb041,+cip,cip_susceptible	rb041,control,cip_susceptible	rb121,+gent,gent_susceptible	rb121,+mero,mero_susceptible	rb121,control,gent_susceptible	rb121,control,mero_susceptible	rb122,+gent,gent_resistant	rb122,control,gent_resistant	rb257,+mero,mero_resistant	rb257,control,mero_resistant	uhkpc05,FeLimited,fromBlood	uhkpc05,fromBlood	uhkpc07	uhkpc07,control,fromUrine	uhkpc07,fromUrine	uhkpc18	uhkpc18,control,fromUrine	uhkpc18,fromUrine	uhkpc33	uhkpc33,control,fromUrine	uhkpc33,fromUrine	uhkpc48	uhkpc48,FeLimited,fromUrine	uhkpc67	uhkpc67,control,fromBlood	uhkpc67,fromBlood	vakpc297	vakpc297,FeLimited,fromUrine
AGT24519 (N559_2848)	98.97	104.46	58.77	81.36	72.81	16.93	122.39	58.16	15.63	139.14	153.64	28.79	121.28	46.33	46.1	89.09	49.16	10.93	143.98	122.67	213.82	42.02	97.72	112.05	235.34	95.03	130.6	86.86	104.91	146.14	140.13	101.02	66.63	30.33	105.94	119.01	73.16	76.18	38.71	94.3	117.46	91.63	58.63	59.55	194.4	30.54	212.15	231.68	104.91	89.41	95.85	90.57	85.6	117.01	86.51	97.91	88.08	30.85	68.15	99.98	222.03	91.39	30.33	95.37	79.09	90.26	112.05	107.73	130.32	115.51	95.54	13.4	11.25	106.18	98.91	8.68	114.39	121.53	17.77	112.06	121.37	12.28	51.75	14.87	110.04	103.9	18.72	62.39
AGT24543 (N559_2874)	267.08	225.95	122.35	284.97	441.23	38.46	117.51	237.83	75.63	272.63	219.3	85.1	122.57	111.56	138.75	78.7	127.43	13.43	251.32	280.62	130.92	75.06	140.56	146.98	733.96	153.16	269.3	132.79	193.57	407.24	202.62	190.5	104.43	147.68	157.84	218.74	112.3	158.15	147.31	236.08	278.25	199.98	128.32	107.43	254.6	125.3	659.02	658.39	193.57	170.33	234.6	230.53	220.27	163.01	224.86	116.6	204.05	134.32	199.08	211.73	230.6	150.2	147.68	190.33	143.35	205.7	146.98	129.72	358.33	288.36	376.19	36.93	45.85	622.16	387.57	23.61	277.32	205.22	89.67	454.64	361.13	37.12	149.49	61.86	364.52	249.08	60.77	292.47

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)