Heatmap: Cluster_55 (HCCA)

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Gene	strain_5001420,control,fromUrine	strain_5001420,fromUrine	ch1034,13h_old_biofilm,biofilm_dispersed	ch1034,13h_old_biofilm,sessile	ch1034,7h_old_biofilm,sessile	ch1034,Log,planktonic	ch1034,Stationary,planktonic	control,fromNasalSwab,fromSwine	dmc1097	dmc1097,control,fromBlood	dmc1097,fromBlood	ekp16,fromSputum	eugenol,fromNasalSwab,fromSwine	fromBlood	fromHospitalPatients	fromRectalSwab	fromUrine	je01	k26,mero_susceptible,fromHospitalPatients	k56,mero_resistant,fromHospitalPatients	kctc2242	kp4,FeLimited,fromRespiratoryTract	kpr1,+CTX	kpr1,+gent	kpr1,+mero	kpr1,+TMP/SMX	kpr1,control	kpr2,+CTX	kpr2,+gent	kpr2,+mero	kpr2,+TMP/SMX	kpr2,control	kps1,+CTX	kps1,+gent	kps1,+mero	kps1,+TMP/SMX	kps1,control	kps2,+CTX	kps2,+gent	kps2,+mero	kps2,+TMP/SMX	kps2,control	mrsn 1319	ms6671	njst258-1,FeLimited,fromUrine	njst258-1,fromUrine	rb011,+mero,mero_resistant	rb011,control,mero_resistant	rb012,+gent,gent_resistant	rb012,control,gent_resistant	rb013,+cip,cip_resistant	rb013,control,cip_resistant	rb039,+cip,cip_resistant	rb039,+mero,mero_susceptible	rb039,control,cip_resistant	rb039,control,mero_susceptible	rb040,+cip,cip_susceptible	rb040,+gent,gent_susceptible	rb040,control,cip_susceptible	rb040,control,gent_susceptible	rb041,+cip,cip_susceptible	rb041,control,cip_susceptible	rb121,+gent,gent_susceptible	rb121,+mero,mero_susceptible	rb121,control,gent_susceptible	rb121,control,mero_susceptible	rb122,+gent,gent_resistant	rb122,control,gent_resistant	rb257,+mero,mero_resistant	rb257,control,mero_resistant	uhkpc05,FeLimited,fromBlood	uhkpc05,fromBlood	uhkpc07	uhkpc07,control,fromUrine	uhkpc07,fromUrine	uhkpc18	uhkpc18,control,fromUrine	uhkpc18,fromUrine	uhkpc33	uhkpc33,control,fromUrine	uhkpc33,fromUrine	uhkpc48	uhkpc48,FeLimited,fromUrine	uhkpc67	uhkpc67,control,fromBlood	uhkpc67,fromBlood	vakpc297	vakpc297,FeLimited,fromUrine
AGT22509 (N559_0716)	23.76	16.42	36.68	39.89	64.33	51.63	67.84	5.39	3.31	15.85	13.98	27.64	4.29	37.4	7.71	40.59	38.18	49.26	9.34	11.55	19.88	10.16	36.58	51.03	43.37	28.15	42.84	23.84	39.72	49.51	41.69	33.38	34.75	50.54	42.62	38.42	32.76	34.14	40.04	50.26	40.74	32.31	23.46	7.18	7.59	20.61	39.74	47.19	39.72	44.61	27.43	29.97	26.99	36.62	28.99	24.19	36.21	59.6	22.17	43.68	31.43	28.15	50.54	40.42	51.31	25.57	51.03	54.95	39.61	25.15	12.59	1.5	4.79	30.87	24.14	9.82	22.48	16.82	4.51	19.25	13.24	15.19	13.57	13.4	19.09	13.31	0.49	9.91
AGT25716 (N559_4090)	13.72	11.7	23.97	13.26	9.27	19.49	16.25	8.56	6.72	20.55	13.44	31.37	26.4	42.72	37.31	133.37	48.08	3.46	45.36	47.24	0.0	2.83	38.1	68.19	75.41	27.64	58.48	32.22	64.68	84.99	30.49	36.63	24.42	26.58	60.63	7.74	49.56	39.09	22.45	32.95	31.26	34.48	39.68	0.66	8.9	40.79	60.33	37.04	64.68	39.29	6.36	6.46	12.0	36.38	10.87	24.39	10.32	27.35	7.76	58.75	5.99	7.85	26.58	19.77	92.04	24.01	68.19	111.62	67.99	39.17	9.8	0.0	0.0	36.75	8.2	5.54	14.1	17.99	0.0	11.95	12.36	11.44	8.78	36.05	13.75	15.09	24.9	17.08

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)