1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_39 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16921 (rsbV)
 9.08 6.7 30.39 11.03 21.27 49.58 171.77 6.28 57.04 257.01 152.59 235.88 142.01 44.37 10.25 153.06 62.07 7.48 110.23 45.8 38.01 25.68 88.24 73.38 72.95 12.48 35.58 94.17 196.34
CCL16940 (spoIIAA)
 42.42 189.97 77.43 158.03 57.59 32.58 1289.61 42.64 34.49 635.15 95.36 263.07 118.02 50.74 138.27 55.82 24.65 45.44 28.04 67.9 140.78 443.94 38.47 35.83 26.27 46.66 142.46 23.64 36.65
CCL16941 (spoIIAB)
 32.34 174.6 52.28 105.31 37.48 64.74 1311.36 40.03 35.06 579.84 110.21 299.82 133.1 19.37 123.22 60.12 32.24 42.56 39.21 42.26 87.74 1508.99 44.66 41.21 31.32 30.2 251.92 28.15 28.52
CCL16942 (sigF)
 16.98 85.92 21.71 52.69 14.99 30.17 1132.17 23.6 22.9 456.44 100.46 262.31 117.7 11.3 55.23 63.49 24.48 18.42 25.41 22.74 52.99 1043.7 33.48 40.76 31.72 14.31 249.95 22.84 41.28
CCL17155 (BN171_1330016)
 6.06 11.57 11.51 20.71 9.43 0.97 333.06 3.67 32.06 128.58 25.98 45.2 19.66 8.03 11.0 10.95 46.95 4.31 12.37 1.75 6.11 0.86 12.5 3.3 1.72 1.25 86.42 21.48 10.2
CCL17397 (BN171_1480009)
 1.02 0.65 0.81 0.76 1.38 1.86 24.88 0.74 1.11 4.32 2.91 3.28 5.74 1.69 0.57 10.23 1.15 1.41 1.62 1.15 0.61 5.62 3.57 2.51 3.49 0.67 2.69 6.24 1.39
CCL17560 (BN171_1550013)
 2.44 3.3 2.95 6.44 2.31 1.16 91.05 0.93 1.2 15.43 1.61 5.2 4.33 2.1 2.59 11.65 0.54 1.32 1.84 3.67 8.3 2.42 1.26 2.24 3.13 1.64 5.75 3.24 0.12
CCL17561 (BN171_1550014)
 2.13 1.69 3.12 5.18 1.57 1.44 110.67 0.77 0.35 21.12 2.39 10.51 6.1 1.6 1.61 17.71 0.84 1.14 2.96 3.04 4.63 2.58 2.12 2.98 5.61 1.57 4.88 2.5 0.0
CCL17562 (BN171_1550015)
 2.02 1.7 3.86 7.1 2.81 4.18 137.56 0.89 2.32 30.09 4.03 10.84 10.51 2.29 1.36 23.45 2.4 1.74 4.94 4.74 8.35 3.87 5.86 4.95 7.19 2.1 6.32 3.73 2.59
CCL17574 (BN171_1580001)
 26.08 28.03 19.91 33.57 17.98 24.15 101.94 12.35 10.52 54.1 28.22 27.23 29.57 10.47 9.44 30.57 9.68 8.49 27.75 28.68 21.22 42.01 48.07 13.39 21.23 16.07 59.49 20.53 19.35
CCL17774 (BN171_1790003)
 0.49 0.23 0.57 1.09 1.03 0.14 27.06 0.34 0.29 5.36 0.99 1.38 2.31 0.18 0.49 1.31 0.35 0.32 0.66 0.47 0.28 7.65 0.31 0.15 0.33 0.16 2.34 4.27 0.17
CCL17836 (asnB)
 5.43 3.06 4.37 4.71 3.34 4.61 22.64 2.38 10.1 12.35 11.02 8.39 12.76 6.07 3.23 7.98 3.97 3.65 10.19 6.48 6.5 7.35 11.04 8.84 6.6 3.52 16.54 3.67 7.15
CCL17869 (BN171_1900001)
 0.0 0.0 0.0 0.0 0.0 3.83 132.88 0.0 0.36 33.54 4.18 14.69 1.25 0.4 0.0 0.0 3.99 0.0 0.45 0.0 0.46 0.0 0.14 0.41 0.24 0.0 3.36 0.24 0.0
CCL18183 (BN171_2140025)
 11.3 4.35 30.04 23.85 34.02 41.55 177.64 8.88 35.73 30.54 32.8 24.6 55.27 43.93 14.24 39.3 30.13 24.13 26.34 27.63 13.98 33.85 26.79 32.52 40.51 21.04 39.02 27.07 22.97
CCL18351 (BN171_2230001)
 3.7 0.55 6.41 4.88 6.67 5.35 29.5 1.23 8.94 12.55 8.86 9.68 13.4 5.75 1.35 16.43 4.47 4.2 4.15 6.01 4.63 0.55 3.7 2.78 4.2 3.04 0.53 10.48 7.93
CCL18841 (BN171_2680010)
 7.6 9.97 8.69 25.07 16.65 3.36 122.91 2.75 10.76 0.0 0.0 9.03 6.97 6.77 10.69 0.0 17.81 4.75 5.15 10.9 22.5 23.98 2.7 3.42 1.44 7.23 11.43 5.65 0.0
CCL18854 (BN171_2690011)
 35.88 18.84 26.46 17.74 29.61 25.47 129.06 26.04 14.59 73.14 60.19 54.98 75.84 39.26 19.6 73.14 28.46 32.41 21.76 41.37 14.06 76.3 43.16 20.28 36.04 26.32 27.45 30.73 50.7
CCL19231 (uppS)
 8.96 3.21 6.4 9.2 11.08 4.18 85.04 8.34 16.48 26.81 13.9 20.06 19.07 7.87 2.94 14.31 8.01 8.77 11.48 6.93 5.71 59.51 26.9 12.2 9.71 7.64 34.35 14.14 8.73
CCL19329 (abgT)
 0.64 1.21 0.61 1.34 0.73 0.14 16.3 0.73 0.24 2.1 0.55 5.32 1.52 0.39 0.83 2.43 0.67 0.63 1.04 0.45 0.48 0.85 1.83 0.52 0.36 0.34 1.54 1.83 1.21
CCL19332 (BN171_3050006)
 0.07 0.07 0.13 0.38 0.04 0.33 5.46 0.0 0.19 0.87 1.25 2.53 1.27 0.09 0.08 1.55 0.18 0.08 0.43 0.19 0.3 0.19 0.37 0.27 0.34 0.07 1.92 1.73 0.2
CCL19457 (BN171_3150020)
 1.84 1.33 2.73 1.89 2.65 1.71 77.14 2.03 0.98 10.06 4.04 4.59 4.01 1.17 1.15 5.18 1.69 1.45 2.49 1.66 1.08 3.78 2.81 0.64 1.05 1.79 1.7 0.0 2.73
CCL19458 (BN171_3150021)
 0.93 0.51 1.15 1.43 1.44 0.76 72.42 0.73 0.86 6.55 1.83 3.79 3.39 0.83 0.92 2.8 0.88 1.18 1.62 0.53 0.76 3.35 1.27 0.64 0.56 0.48 2.11 0.0 1.29
CCL19459 (BN171_3150022)
 0.23 0.14 0.67 0.85 0.6 0.47 145.54 0.21 1.51 10.62 2.09 2.84 3.19 0.57 0.33 2.42 0.58 0.37 1.52 0.71 0.93 3.16 0.68 0.59 0.69 0.36 2.51 0.01 0.36
CCL19497 (BN171_3180021)
 3.75 1.56 4.6 4.13 4.15 7.57 9.56 2.1 3.84 5.68 5.08 3.28 8.02 4.58 1.81 9.26 2.36 2.79 7.41 7.07 3.57 1.43 8.73 1.68 4.02 3.04 4.85 6.37 2.56
CCL19632 (BN171_3330003)
 7.03 7.7 7.61 8.33 7.41 12.36 21.26 7.0 14.12 25.79 20.6 20.96 18.27 6.8 9.28 23.66 7.82 8.87 21.51 13.26 10.61 11.94 21.66 6.71 7.86 9.98 2.54 12.04 18.56
CCL19770 (BN171_3470008)
 17.18 1.33 72.0 35.18 68.11 86.06 505.25 2.86 97.87 310.67 317.11 336.05 641.75 56.61 13.19 936.32 198.06 36.6 379.22 63.74 45.81 77.83 415.02 252.28 411.74 12.81 59.41 316.79 432.3
CCL19771 (BN171_3470009)
 98.32 18.95 130.77 81.11 108.86 131.72 577.7 28.6 127.53 444.23 452.77 439.02 388.34 157.27 38.36 477.49 225.56 106.03 390.64 106.39 95.84 89.76 392.5 287.04 410.31 62.5 63.39 304.08 471.89
CCL19772 (BN171_3470010)
 70.49 19.03 104.17 39.42 95.1 73.29 556.83 61.12 36.38 369.47 276.98 330.61 229.3 136.25 23.0 314.42 82.24 81.65 138.39 101.84 31.24 157.84 161.92 74.91 147.19 77.8 18.51 144.43 294.61
CCL19884 (cobC)
 40.91 22.26 59.02 35.19 59.36 94.08 204.34 21.76 70.1 342.42 318.37 269.88 194.86 50.68 33.35 250.16 55.45 36.94 175.28 113.17 110.2 35.8 142.28 79.96 97.82 50.76 26.6 74.81 225.89
CCL19885 (cobS)
 12.04 11.46 24.01 12.74 22.81 64.31 127.06 7.88 18.86 229.85 183.18 161.58 121.46 13.61 18.38 155.22 26.39 17.25 90.72 21.67 44.78 64.76 62.33 49.13 62.59 12.18 4.82 28.57 114.42
CCL19886 (cobU)
 18.07 22.95 25.68 21.03 24.64 98.94 146.73 14.26 35.18 258.33 222.1 226.85 137.25 17.21 29.18 165.74 26.52 23.72 140.3 41.42 96.6 53.54 78.76 67.28 82.44 19.48 6.98 30.07 164.47
CCL19962 (BN171_3610005)
 69.79 17.22 238.95 90.65 138.99 244.27 1422.34 52.5 36.97 732.63 542.53 685.3 560.25 119.37 39.7 1009.97 151.2 95.8 460.05 227.43 107.22 84.38 502.9 256.66 442.75 90.69 305.88 489.32 539.79
CCL20018 (BN171_3670001)
 0.0 0.0 4.49 5.66 1.35 4.44 600.06 1.01 3.15 182.83 11.33 8.88 58.72 0.97 1.47 12.72 4.86 1.35 20.13 2.63 4.32 31.97 18.85 11.4 13.69 0.0 59.81 19.86 6.86
CCL20345 (BN171_4230002)
 2.07 2.07 1.38 1.94 4.11 3.04 644.87 1.71 0.0 11.87 13.43 11.09 38.24 1.37 1.59 0.0 4.97 1.51 0.66 4.39 0.79 0.0 0.25 3.99 2.59 3.15 55.78 111.44 15.8
CCL20444 (BN171_460008)
 20.65 9.03 26.69 13.59 23.65 36.22 300.53 14.9 5.98 138.05 78.64 109.5 70.06 20.41 14.26 60.79 28.54 25.37 39.78 32.08 12.68 121.54 48.92 33.58 40.09 18.19 61.55 36.84 73.95
CCL20599 (cwlD)
 28.14 9.7 52.89 69.67 71.03 8.52 142.25 29.73 3.45 20.96 23.93 24.68 65.71 34.16 15.68 41.39 18.51 42.93 21.48 21.78 9.85 49.12 15.04 7.24 26.25 22.67 31.49 24.14 28.86
CCL20603 (BN171_710001)
 19.74 17.15 17.89 19.85 20.53 20.46 95.33 20.84 19.74 51.37 52.29 47.07 55.66 13.3 16.22 61.01 31.7 24.01 43.02 20.61 16.12 54.02 67.51 37.92 55.4 13.38 91.06 42.1 43.0
CCL20615 (BN171_740003)
 10.39 3.56 21.19 9.93 22.18 14.08 40.86 6.68 12.87 53.09 44.58 31.27 43.44 17.68 8.76 36.94 12.23 16.64 37.56 17.78 15.26 1.83 29.01 26.99 27.33 7.93 10.5 30.01 35.3
CCL20631 (BN171_770008)
 0.94 0.48 1.79 1.6 0.86 4.79 16.34 0.27 13.42 23.74 19.15 11.11 23.09 1.42 0.96 22.03 10.4 0.88 21.22 2.09 1.89 2.39 19.33 13.86 16.65 0.67 5.93 19.7 17.47
CCL20667 (BN171_880003)
 2.07 1.84 1.51 2.41 1.9 0.0 14.06 1.44 0.72 3.14 1.85 2.07 4.14 1.1 1.83 3.38 2.04 1.95 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.99
CCL20717 (cooS)
 60.38 787.92 89.56 732.37 82.18 133.21 3398.28 97.6 741.0 1737.98 879.21 868.68 837.73 29.4 618.49 90.74 317.54 79.72 692.72 112.37 789.82 490.82 282.7 337.04 128.99 66.6 637.65 159.08 557.88
CCL20721 (fchA)
 30.07 273.99 39.02 233.91 51.08 102.39 2342.05 63.46 75.44 1576.48 792.39 836.38 405.86 14.73 236.29 69.77 176.24 45.98 158.81 28.53 205.75 216.04 46.87 65.41 55.76 30.74 161.33 113.23 509.08
CCL20722 (folD)
 34.04 296.81 50.98 291.21 84.13 70.93 1451.3 79.63 31.64 878.06 525.33 576.62 255.25 15.73 252.13 51.58 141.87 50.85 131.42 27.36 216.25 241.96 33.88 45.92 40.33 38.87 109.94 67.88 377.98
CCL20723 (BN171_960015)
 19.32 186.72 30.93 170.41 39.47 69.49 1448.34 43.48 29.76 1122.53 550.18 599.13 198.14 11.32 148.38 49.7 191.78 32.93 142.18 17.41 139.97 326.15 36.53 37.42 30.06 20.6 86.32 76.34 349.63
CCL20724 (metF)
 37.61 373.52 55.17 333.3 90.71 52.48 1333.37 87.21 32.18 1040.09 486.89 518.25 193.13 20.8 306.35 38.97 163.72 57.29 124.49 31.8 229.56 273.16 28.89 42.47 34.15 40.66 95.44 88.37 325.74
CCL20725 (BN171_960017)
 16.11 180.62 17.39 155.58 26.46 38.44 1982.03 34.72 34.08 1348.24 639.06 716.11 316.05 5.46 141.37 58.4 154.69 23.79 123.84 9.33 120.44 169.24 31.81 56.89 46.37 12.87 142.89 98.59 501.51
CCL20726 (BN171_960018)
 26.06 404.36 31.74 373.85 49.58 68.29 2010.86 70.92 30.44 1226.15 663.54 798.02 327.28 10.93 306.53 53.09 216.43 41.94 166.61 19.82 282.25 166.92 36.99 54.92 36.93 24.75 112.41 101.26 463.66
CCL20731 (gcvH)
 872.65 3905.06 999.69 4142.94 579.05 366.0 9082.7 600.44 1077.1 3797.01 2762.22 2682.67 1775.03 267.46 2149.6 692.88 1977.19 383.05 932.85 1319.26 4156.36 692.36 613.32 1080.97 676.66 464.32 1377.96 1205.81 2328.36
CCL20732 (BN171_960024)
 8.91 25.0 10.29 35.76 8.08 18.32 214.38 5.57 59.7 157.35 81.77 89.04 49.23 3.15 17.61 24.06 34.4 4.61 61.67 13.21 55.29 44.87 45.16 26.75 15.35 6.58 52.3 26.25 59.41
CCL20733 (BN171_960025)
 10.65 30.7 15.95 49.0 13.19 18.53 287.06 8.03 65.71 190.28 116.13 110.53 68.87 6.39 23.05 26.88 37.94 6.34 72.31 17.83 64.79 72.25 51.98 36.27 21.3 9.14 74.77 21.0 83.32
CCL20734 (BN171_960026)
 4.77 13.78 9.07 27.92 7.97 17.47 207.43 3.22 34.17 196.28 103.12 104.26 51.54 4.03 12.28 22.31 26.07 4.06 53.05 10.4 47.94 20.0 44.62 22.08 13.92 5.06 37.8 26.08 66.33
CCL20735 (BN171_960027)
 21.8 52.59 23.55 69.37 20.88 23.74 221.96 14.3 33.83 165.74 90.1 100.16 46.88 12.89 33.82 20.0 27.74 12.33 57.6 21.33 72.93 58.8 41.21 19.68 11.29 13.13 34.09 24.2 55.47

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)