Heatmap: Cluster_64 (HCCA)

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Gene	strain_5001420,control,fromUrine	strain_5001420,fromUrine	ch1034,13h_old_biofilm,biofilm_dispersed	ch1034,13h_old_biofilm,sessile	ch1034,7h_old_biofilm,sessile	ch1034,Log,planktonic	ch1034,Stationary,planktonic	control,fromNasalSwab,fromSwine	dmc1097	dmc1097,control,fromBlood	dmc1097,fromBlood	ekp16,fromSputum	eugenol,fromNasalSwab,fromSwine	fromBlood	fromHospitalPatients	fromRectalSwab	fromUrine	je01	k26,mero_susceptible,fromHospitalPatients	k56,mero_resistant,fromHospitalPatients	kctc2242	kp4,FeLimited,fromRespiratoryTract	kpr1,+CTX	kpr1,+gent	kpr1,+mero	kpr1,+TMP/SMX	kpr1,control	kpr2,+CTX	kpr2,+gent	kpr2,+mero	kpr2,+TMP/SMX	kpr2,control	kps1,+CTX	kps1,+gent	kps1,+mero	kps1,+TMP/SMX	kps1,control	kps2,+CTX	kps2,+gent	kps2,+mero	kps2,+TMP/SMX	kps2,control	mrsn 1319	ms6671	njst258-1,FeLimited,fromUrine	njst258-1,fromUrine	rb011,+mero,mero_resistant	rb011,control,mero_resistant	rb012,+gent,gent_resistant	rb012,control,gent_resistant	rb013,+cip,cip_resistant	rb013,control,cip_resistant	rb039,+cip,cip_resistant	rb039,+mero,mero_susceptible	rb039,control,cip_resistant	rb039,control,mero_susceptible	rb040,+cip,cip_susceptible	rb040,+gent,gent_susceptible	rb040,control,cip_susceptible	rb040,control,gent_susceptible	rb041,+cip,cip_susceptible	rb041,control,cip_susceptible	rb121,+gent,gent_susceptible	rb121,+mero,mero_susceptible	rb121,control,gent_susceptible	rb121,control,mero_susceptible	rb122,+gent,gent_resistant	rb122,control,gent_resistant	rb257,+mero,mero_resistant	rb257,control,mero_resistant	uhkpc05,FeLimited,fromBlood	uhkpc05,fromBlood	uhkpc07	uhkpc07,control,fromUrine	uhkpc07,fromUrine	uhkpc18	uhkpc18,control,fromUrine	uhkpc18,fromUrine	uhkpc33	uhkpc33,control,fromUrine	uhkpc33,fromUrine	uhkpc48	uhkpc48,FeLimited,fromUrine	uhkpc67	uhkpc67,control,fromBlood	uhkpc67,fromBlood	vakpc297	vakpc297,FeLimited,fromUrine
AGT25722 (N559_4096)	60.8	58.2	61.04	74.83	95.03	38.77	66.83	94.34	69.84	77.97	80.45	99.32	249.16	187.44	119.01	33.23	177.04	5.88	113.12	147.09	0.0	49.94	64.24	67.42	162.21	61.08	87.2	84.4	93.67	98.48	61.11	73.72	83.31	42.28	87.36	159.13	62.36	100.4	41.82	77.84	197.55	66.02	61.99	94.28	39.83	126.6	156.47	153.66	93.67	92.79	89.08	86.95	80.79	117.12	82.15	81.77	92.45	39.3	63.56	66.52	118.32	85.28	42.28	77.03	73.28	56.57	67.42	68.37	96.84	76.55	70.34	52.84	61.96	76.56	74.81	62.32	79.52	90.48	116.14	74.93	91.08	77.95	41.46	80.16	80.88	97.07	79.01	36.09
AGT26476 (N559_4892)	71.1	86.6	53.04	168.68	87.66	58.54	100.08	72.12	70.11	76.15	88.47	24.94	71.01	90.7	67.49	101.05	103.46	25.19	114.22	142.79	28.48	25.69	64.14	87.21	131.39	53.75	83.19	68.56	85.11	89.55	68.68	77.25	95.01	68.0	66.68	165.98	75.72	93.94	72.19	85.0	199.73	88.24	84.1	122.45	65.06	96.99	126.85	122.63	85.11	91.53	74.39	78.69	68.93	96.74	70.15	49.26	74.13	78.9	83.49	104.08	70.56	76.1	68.0	99.06	107.36	71.81	87.21	81.12	76.97	68.63	43.02	65.17	120.66	83.27	98.3	102.0	80.83	108.59	106.83	79.09	96.72	136.72	54.31	115.26	69.65	89.17	50.24	54.67

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)