Heatmap: Cluster_64 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	strain_5001420,control,fromUrine	strain_5001420,fromUrine	ch1034,13h_old_biofilm,biofilm_dispersed	ch1034,13h_old_biofilm,sessile	ch1034,7h_old_biofilm,sessile	ch1034,Log,planktonic	ch1034,Stationary,planktonic	control,fromNasalSwab,fromSwine	dmc1097	dmc1097,control,fromBlood	dmc1097,fromBlood	ekp16,fromSputum	eugenol,fromNasalSwab,fromSwine	fromBlood	fromHospitalPatients	fromRectalSwab	fromUrine	je01	k26,mero_susceptible,fromHospitalPatients	k56,mero_resistant,fromHospitalPatients	kctc2242	kp4,FeLimited,fromRespiratoryTract	kpr1,+CTX	kpr1,+gent	kpr1,+mero	kpr1,+TMP/SMX	kpr1,control	kpr2,+CTX	kpr2,+gent	kpr2,+mero	kpr2,+TMP/SMX	kpr2,control	kps1,+CTX	kps1,+gent	kps1,+mero	kps1,+TMP/SMX	kps1,control	kps2,+CTX	kps2,+gent	kps2,+mero	kps2,+TMP/SMX	kps2,control	mrsn 1319	ms6671	njst258-1,FeLimited,fromUrine	njst258-1,fromUrine	rb011,+mero,mero_resistant	rb011,control,mero_resistant	rb012,+gent,gent_resistant	rb012,control,gent_resistant	rb013,+cip,cip_resistant	rb013,control,cip_resistant	rb039,+cip,cip_resistant	rb039,+mero,mero_susceptible	rb039,control,cip_resistant	rb039,control,mero_susceptible	rb040,+cip,cip_susceptible	rb040,+gent,gent_susceptible	rb040,control,cip_susceptible	rb040,control,gent_susceptible	rb041,+cip,cip_susceptible	rb041,control,cip_susceptible	rb121,+gent,gent_susceptible	rb121,+mero,mero_susceptible	rb121,control,gent_susceptible	rb121,control,mero_susceptible	rb122,+gent,gent_resistant	rb122,control,gent_resistant	rb257,+mero,mero_resistant	rb257,control,mero_resistant	uhkpc05,FeLimited,fromBlood	uhkpc05,fromBlood	uhkpc07	uhkpc07,control,fromUrine	uhkpc07,fromUrine	uhkpc18	uhkpc18,control,fromUrine	uhkpc18,fromUrine	uhkpc33	uhkpc33,control,fromUrine	uhkpc33,fromUrine	uhkpc48	uhkpc48,FeLimited,fromUrine	uhkpc67	uhkpc67,control,fromBlood	uhkpc67,fromBlood	vakpc297	vakpc297,FeLimited,fromUrine
AGT25722 (N559_4096)	0.24	0.23	0.24	0.3	0.38	0.16	0.27	0.38	0.28	0.31	0.32	0.4	1.0	0.75	0.48	0.13	0.71	0.02	0.45	0.59	0.0	0.2	0.26	0.27	0.65	0.25	0.35	0.34	0.38	0.4	0.25	0.3	0.33	0.17	0.35	0.64	0.25	0.4	0.17	0.31	0.79	0.26	0.25	0.38	0.16	0.51	0.63	0.62	0.38	0.37	0.36	0.35	0.32	0.47	0.33	0.33	0.37	0.16	0.26	0.27	0.47	0.34	0.17	0.31	0.29	0.23	0.27	0.27	0.39	0.31	0.28	0.21	0.25	0.31	0.3	0.25	0.32	0.36	0.47	0.3	0.37	0.31	0.17	0.32	0.32	0.39	0.32	0.14
AGT26476 (N559_4892)	0.36	0.43	0.27	0.84	0.44	0.29	0.5	0.36	0.35	0.38	0.44	0.12	0.36	0.45	0.34	0.51	0.52	0.13	0.57	0.71	0.14	0.13	0.32	0.44	0.66	0.27	0.42	0.34	0.43	0.45	0.34	0.39	0.48	0.34	0.33	0.83	0.38	0.47	0.36	0.43	1.0	0.44	0.42	0.61	0.33	0.49	0.64	0.61	0.43	0.46	0.37	0.39	0.35	0.48	0.35	0.25	0.37	0.4	0.42	0.52	0.35	0.38	0.34	0.5	0.54	0.36	0.44	0.41	0.39	0.34	0.22	0.33	0.6	0.42	0.49	0.51	0.4	0.54	0.53	0.4	0.48	0.68	0.27	0.58	0.35	0.45	0.25	0.27

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)