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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | 10403S,Log | 10403S,WT | 10403S,LMRG 00730 deleted | 10403S,delta sigB,Log | 10403S,WT,Log | 10403S,virR deleted,Log | 10403S,WT,Bile | 10403S,WT,ctrl | 10403S,delta sigB,Bile | 10403S,delta sigB,ctrl | 10403S | ATCC 19115,Lactic acid(1h) | ATCC 19115,ctrl | WT | EGD | ATCC 19115,linalool | EDGe,37C(20min) | EDGe,20C(20min) | EDGe,20C(3h) | EDGe,Light | EDGe,Dark | EGD,MQ Water(0h) | EGD,MW Water(10min) | EGD,0.1875% L.plantarum(10min) | EGD,MQ Water(1h) | EGD,0.1875% L.plantarum(1h) | EGD,0.1875% L.plantarum+1mg/ml Pro-K(1h) | EGD,MQ Water(at 0h) | EGD,MQ Water(at 3h) | EGD,Ampicillin 0.03g/ml(at 3h) | EGD,Tetracycline 0.035g/ml(at 3h) | EGD,Gentamicin 0.3g/ml(at 3h) | EGD,Co-trimoxazole 0.2g/ml(at 3h) | EGDe | EGD,WT | 37C,Late-Log | EGD,delta Lmo1408 | EGD,delta Lmo0422 | EGD,delta Lmo0599 | EGDe,Lincomycin 0.25g/ml | EGDe,Chloramphenicol 0.4g/ml | EGDe,Erythromycin 0.03125g/ml | EGDe,Kanamycin 0.5g/ml | EGDe,Ofloxacin 2g/ml | EGDe,Ampicillin 1g/ml | EGDe,Bacitracin 8g/ml | EGDe,ctrl | EGDe,Lincomycin 0.5g/ml | EGDe,WT | EGDe,delta lftR | EGDe,37C,Late-Log | EGDe,WT,Light | EGDe,WT,Dark | EGDe,Light | EGDe,Dark | FFH,30C | FFH,10C | H1,37C,Late-Log | H2,37C,Late-Log | H3,37C,Late-Log | H5,37C,Late-Log | H6,37C,Late-Log | H7,37C,Late-Log | H8,37C,Late-Log | H10,37C,Late-Log | H11,37C,Late-Log | H17,37C,Late-Log | H19,37C,Late-Log | H27,37C,Late-Log | H28,37C,Late-Log | H31,37C,Late-Log | H32,37C,Late-Log | 568 | H7858,Log | H7858,WT,Bile | H7858,WT,ctrl | H7858,delta sigB,Bile | H7858,delta sigB,ctrl | LL195,ctrl | LL195,acid | Lm1,4C,Late-Stationary | Lm1,4C,Late-Log | Lm1,4C,Log | Lm1,WT,4C,Log | Lm1,4C,Lag | Lm1,20C,Late-Stationary | Lm1,20C,Late-Log | Lm1,20C,Log | Lm1,WT,20C,Log | Lm1,20C,Lag | LO28,37C,Late-Log | N12-0605,ctrl | N12-0605,acid | N13-0047,ctrl | N13-0047,acid | N13-1507,ctrl | N13-1507,acid | rli47,Log | WT,Log | Scott A,37C,Late-Log |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AKI48673 (L2625_00741) | -3.08 | -2.34 | -2.81 | -2.45 | -3.23 | -3.44 | -1.77 | -1.77 | -2.04 | -1.83 | -1.89 | 2.57 | -0.3 | -0.9 | -1.37 | -0.46 | -1.08 | -1.51 | -1.44 | -1.55 | -1.67 | -1.7 | -1.51 | -1.48 | -1.46 | -1.58 | -1.81 | -1.32 | -0.9 | -1.21 | -1.41 | -0.62 | -0.88 | -2.72 | -0.99 | -1.0 | -1.17 | -1.52 | -0.97 | -1.56 | -2.02 | -1.75 | -1.95 | -2.17 | -1.92 | -1.62 | -1.67 | -1.19 | -1.13 | 5.45 | -1.35 | -1.55 | -1.33 | -1.51 | -1.84 | -0.85 | -1.05 | -0.89 | 0.58 | 0.48 | 0.29 | 0.81 | 0.58 | -1.17 | 1.18 | -0.89 | -0.16 | 0.17 | -0.01 | 0.16 | -0.43 | -0.1 | -1.78 | -0.59 | 0.2 | -0.62 | 0.18 | -0.19 | -1.18 | -1.29 | 0.6 | -1.24 | -1.44 | -2.17 | -2.89 | -1.33 | -0.37 | -1.98 | -1.89 | -3.1 | -1.29 | -1.54 | -2.2 | -1.61 | -1.08 | -1.75 | -0.77 | -2.76 | -2.93 | -0.99 |
AKI48927 (drrA) | -1.92 | -2.34 | -2.15 | -1.87 | -2.9 | -2.99 | -1.75 | -1.54 | -1.76 | -1.79 | -1.97 | -3.08 | -3.79 | -2.33 | -2.9 | -5.91 | -4.01 | -3.91 | -4.05 | -3.0 | -3.23 | -3.11 | -2.58 | -2.61 | -3.01 | -2.72 | -2.72 | -2.54 | -2.65 | -2.49 | -2.31 | -2.35 | -2.72 | -3.76 | -3.48 | -3.03 | -3.29 | -3.6 | -3.3 | -3.15 | -3.8 | -4.17 | -4.92 | -3.96 | -3.53 | -3.0 | -3.57 | -3.21 | -2.82 | 6.41 | -2.42 | -3.17 | -2.64 | -2.77 | -3.1 | -3.93 | -3.59 | -2.03 | -2.56 | -1.9 | -1.94 | -3.16 | -3.36 | -2.3 | -1.67 | -2.83 | -2.37 | -3.25 | -2.35 | -3.63 | -1.9 | -1.92 | -3.99 | -5.09 | -4.83 | -5.54 | -5.95 | -5.69 | -3.46 | -2.87 | -0.8 | -1.59 | -1.53 | -1.88 | -2.76 | -1.9 | -2.0 | -2.46 | -2.33 | -3.38 | -1.51 | -3.67 | -3.43 | -4.11 | -2.4 | -3.81 | -2.27 | -3.87 | -4.01 | -3.58 |
AKI48928 (L2625_01009) | -2.0 | -1.64 | -1.36 | -1.78 | -3.14 | -3.17 | -2.42 | -1.76 | -2.18 | -2.34 | -2.25 | -0.89 | -2.71 | -2.66 | -1.94 | -3.59 | -3.28 | -3.47 | -3.44 | -2.59 | -2.43 | -2.99 | -2.37 | -2.32 | -2.65 | -3.05 | -2.52 | -2.08 | -2.52 | -2.05 | -2.19 | -2.2 | -2.41 | -2.6 | -2.84 | -2.21 | -3.15 | -3.68 | -2.75 | -2.91 | -2.69 | -3.42 | -2.41 | -3.21 | -2.89 | -2.73 | -3.15 | -2.82 | -2.33 | 6.3 | -2.31 | -2.7 | -2.16 | -2.28 | -2.34 | -3.18 | -3.16 | -0.8 | -2.09 | -1.12 | -0.98 | -2.24 | -2.84 | -2.45 | -1.24 | -1.33 | -1.15 | -1.75 | -2.25 | -3.16 | -1.16 | -0.74 | -3.39 | -3.96 | -3.9 | -3.83 | -4.65 | -4.41 | -2.91 | -2.47 | -0.52 | -1.18 | -1.01 | -1.28 | -1.65 | -1.75 | -1.64 | -1.81 | -1.58 | -2.31 | -1.97 | -2.79 | -2.54 | -3.41 | -2.18 | -3.13 | -2.22 | -3.35 | -3.16 | -2.91 |
AKI48929 (L2625_01010) | -1.58 | -0.54 | -0.27 | -1.04 | 0.49 | 0.51 | -1.61 | -0.79 | -1.42 | -1.38 | -1.65 | -3.95 | -4.34 | -0.55 | 0.29 | -4.97 | -0.3 | 0.09 | -0.16 | 1.12 | 1.0 | -0.0 | 0.27 | 0.02 | 0.06 | -0.22 | 0.09 | -0.02 | -0.26 | -0.06 | 0.13 | -0.28 | -0.24 | 0.76 | 0.19 | 0.03 | -0.16 | -0.16 | -0.13 | 0.06 | 0.09 | 0.01 | 0.07 | 0.06 | 0.08 | -0.27 | 0.11 | -0.05 | 0.23 | 2.62 | 0.98 | 0.66 | 1.1 | 1.11 | 0.95 | -0.2 | 0.24 | 0.02 | -1.87 | -1.91 | -1.86 | -1.42 | -1.13 | 0.25 | -1.34 | 0.04 | 0.43 | -1.49 | -1.95 | -1.6 | 0.06 | 0.52 | 0.1 | -1.9 | -1.2 | -1.45 | -1.13 | -1.25 | -0.06 | -0.66 | -0.33 | 0.67 | 1.18 | 1.11 | 0.26 | -0.87 | -0.59 | 0.5 | 0.87 | 0.5 | 0.3 | -0.23 | -0.35 | -0.02 | -0.4 | 0.09 | -1.53 | 0.15 | 0.05 | -0.9 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.