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Heatmap: Cluster_40 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16977 (BN171_1030027)
 17.07 5.83 61.22 32.42 96.43 275.63 215.72 27.15 1458.75 307.9 332.58 310.13 707.64 68.63 40.88 938.27 949.29 65.79 1012.69 143.29 148.75 163.49 1105.78 2539.55 971.62 131.24 422.79 1462.0 407.8
CCL16983 (BN171_1030033)
 11.56 15.87 18.58 11.46 5.35 433.54 817.83 4.12 1310.3 645.51 633.98 578.96 709.79 12.91 10.27 693.29 938.0 5.55 458.8 31.25 45.02 23.87 712.19 910.12 628.85 6.35 1158.75 2615.86 716.36
CCL17010 (BN171_1080002)
 72.66 80.33 80.61 135.15 60.18 114.01 354.81 70.99 188.0 307.35 189.22 242.16 335.1 76.18 80.46 369.76 209.65 117.75 227.38 69.62 179.81 579.03 204.42 421.34 296.13 47.08 627.18 153.32 162.79
CCL17013 (cwp)
 512.31 281.57 481.2 195.4 284.75 197.25 1527.74 385.82 329.01 961.06 819.35 1068.67 436.62 401.19 180.92 331.7 455.8 334.93 237.97 489.7 426.68 158.06 253.87 299.57 226.07 180.0 1222.49 714.59 954.43
CCL17024 (oppA)
 60.39 3466.39 59.14 1601.6 100.56 323.59 268.19 126.49 1212.47 221.43 175.73 174.9 806.64 14.17 1015.43 391.82 232.31 56.63 1191.48 504.49 2192.11 753.8 1700.07 896.62 414.59 345.75 1765.42 275.28 93.43
CCL17025 (oppD)
 50.06 1051.18 46.56 706.84 64.66 297.41 244.23 89.88 1523.37 203.97 160.14 188.28 733.92 13.82 459.36 326.45 238.29 41.72 967.92 334.5 1111.5 869.01 1503.33 1228.65 351.18 182.64 2767.09 180.43 81.16
CCL17026 (oppF)
 47.1 857.67 46.2 687.67 55.03 229.46 245.13 66.95 2569.57 214.36 157.5 171.49 800.72 14.29 398.69 399.0 287.46 38.34 994.21 318.31 1242.62 524.24 1616.23 1711.18 446.71 147.94 3032.87 259.43 100.83
CCL17239 (ccpA)
 346.33 320.99 314.06 283.84 213.35 131.78 220.35 214.82 276.19 191.9 225.42 223.1 261.5 140.06 158.45 341.1 331.73 197.21 286.98 255.4 147.44 99.8 465.49 431.03 298.89 162.65 197.07 398.77 268.22
CCL17254 (BN171_1410016)
 22.52 41.5 22.07 34.53 21.9 23.98 164.03 35.42 840.37 229.46 292.09 295.86 195.13 24.51 43.03 118.77 88.93 34.48 132.31 24.91 71.47 23.09 232.23 143.63 97.74 17.24 50.59 522.13 275.54
CCL17255 (BN171_1410017)
 129.32 78.22 96.71 63.57 53.89 160.93 82.75 66.48 241.27 115.88 100.5 105.35 103.49 102.55 65.73 154.28 206.82 65.53 141.94 148.7 78.08 37.76 197.03 143.2 163.58 64.08 73.6 187.49 103.24
CCL17270 (BN171_1420013)
 33.66 21.23 37.47 22.88 18.5 35.48 50.63 30.85 57.0 32.46 44.83 46.21 73.45 27.19 15.55 67.99 43.51 22.23 61.88 35.33 30.3 31.38 93.67 124.81 86.08 18.06 69.35 58.88 35.71
CCL17274 (BN171_1430001)
 1293.77 2689.6 1793.2 2419.39 1271.84 495.57 5235.47 1241.67 10010.21 3678.12 3760.89 4899.57 2057.86 282.41 2434.99 597.7 6225.45 1550.61 3409.84 1208.41 975.18 775.79 4466.31 5811.45 1025.64 332.14 2275.4 7407.62 4832.78
CCL17307 (norV)
 652.08 1362.55 650.56 1056.59 505.84 177.88 2066.48 651.7 5140.43 2152.19 2472.68 3151.24 1814.01 291.76 1072.43 846.26 3150.52 725.23 2343.64 431.61 659.69 1059.2 2928.77 4916.05 903.11 203.63 2782.34 2526.37 3572.6
CCL17363 (BN171_1450024)
 63.35 44.11 81.26 124.68 40.74 48.71 134.93 8.03 164.93 131.54 97.27 99.74 98.22 67.89 67.53 83.18 86.3 28.63 79.74 108.78 115.78 52.33 121.51 198.7 94.62 25.24 39.91 91.1 81.69
CCL17364 (bltD)
 17.32 9.51 17.48 24.02 12.47 58.22 233.78 2.4 93.34 149.62 140.13 134.26 81.78 13.66 17.43 69.7 93.97 11.23 67.23 24.62 25.26 10.65 85.91 189.37 95.16 3.46 33.45 62.08 118.57
CCL17444 (iscR)
 1729.1 10.27 2049.9 81.02 676.68 1051.8 272.58 167.37 1315.48 209.96 247.52 247.02 436.09 1140.16 40.64 286.29 1107.87 609.46 463.02 2578.22 40.37 173.63 1364.57 439.09 105.42 919.2 571.12 803.3 388.42
CCL17445 (iscS)
 3075.65 905.21 2529.51 834.28 1014.42 1199.7 1784.11 950.25 3441.47 1328.29 1460.17 1772.83 1063.34 1364.08 821.71 609.23 2556.16 1615.96 1536.49 2694.15 150.33 476.93 3438.64 2916.62 355.05 1351.14 3272.79 2093.22 1847.33
CCL17446 (BN171_1500022)
 2387.15 425.08 1628.06 385.77 538.11 2364.83 1925.62 831.63 4555.0 1304.64 1748.7 2245.47 1614.76 971.37 380.36 1133.97 3406.62 1120.4 2715.2 1780.24 84.72 863.26 6712.77 4243.29 672.92 1122.35 5546.93 5255.4 2902.4
CCL17453 (fur)
 1936.55 3110.92 1883.63 2419.43 1395.75 629.39 2801.9 2075.41 8334.6 1914.57 2228.39 2741.45 1514.86 589.17 1626.94 838.83 3131.04 1604.47 2137.45 945.94 819.19 150.93 4207.55 6119.81 1053.83 598.43 1221.02 2745.08 2864.25
CCL17468 (BN171_1510010)
 22.65 10.73 24.76 25.19 16.14 29.93 33.46 7.42 77.78 35.65 29.13 25.95 49.35 18.48 13.82 42.17 19.59 8.39 26.52 30.38 23.83 8.68 37.06 15.04 21.66 15.71 20.91 30.1 29.22
CCL17500 (BN171_1520018)
 35.02 40.19 55.61 45.15 28.79 43.93 197.68 19.86 316.78 148.13 86.43 108.06 105.7 29.52 29.92 91.54 53.82 15.64 59.36 76.05 69.28 25.27 71.53 102.78 64.46 24.58 61.19 136.82 69.4
CCL17547 (BN171_1540026)
 13.1 6.42 43.92 14.32 23.5 227.64 284.56 7.33 39.3 420.59 362.65 360.22 523.05 29.54 13.7 628.17 362.64 17.13 312.05 48.67 31.61 13.83 639.87 642.36 512.87 19.99 90.76 340.64 345.46
CCL17575 (BN171_1580002)
 96.4 91.79 51.98 50.24 89.72 545.27 663.88 171.04 517.56 638.28 1149.48 923.12 1371.55 83.68 190.77 1148.38 787.24 201.49 1401.48 105.26 518.38 734.7 1364.51 1640.18 1456.8 144.53 1074.33 629.8 1319.35
CCL17576 (BN171_1580003)
 69.25 57.69 52.08 46.38 62.41 525.35 1109.74 85.9 701.25 1004.08 2037.81 1620.55 2065.7 129.54 116.89 1963.74 1911.12 111.47 2240.74 129.67 644.05 781.78 2388.16 3441.89 2259.92 103.13 2055.52 1716.12 2621.09
CCL17609 (BN171_1620002)
 8.71 2.12 6.16 7.88 6.1 27.43 56.67 1.77 39.18 45.16 32.19 21.21 29.88 10.0 3.92 32.08 21.83 6.46 18.34 4.03 10.52 4.54 31.22 27.87 21.71 2.74 10.22 0.0 21.93
CCL17610 (BN171_1630001)
 30.91 25.83 20.79 22.86 24.08 23.6 43.44 20.85 132.9 40.13 27.86 33.23 63.38 21.63 36.88 63.73 50.63 40.33 60.73 26.06 27.14 63.59 66.63 90.98 62.92 17.62 96.59 24.12 27.56
CCL17646 (BN171_1640036)
 63.82 65.36 66.49 124.38 52.89 17.21 129.12 27.38 473.94 138.32 101.41 112.96 97.64 63.68 85.47 52.94 131.67 63.3 149.95 70.19 136.87 33.31 221.1 243.08 85.26 29.98 111.02 234.66 102.85
CCL17649 (BN171_1640039)
 39.9 17.17 15.54 14.93 21.8 5.51 133.92 39.74 8.77 30.2 46.4 33.98 231.47 44.42 23.93 4.39 7.37 40.13 222.74 25.19 10.71 7.7 139.17 134.94 11.35 12.26 617.75 10.13 30.16
CCL17724 (BN171_1730003)
 919.82 426.74 762.33 303.42 317.68 268.01 409.84 315.98 899.6 440.72 471.86 423.13 764.78 847.88 419.25 454.14 1185.92 441.72 448.36 777.7 396.62 223.95 197.65 621.56 540.64 199.17 312.01 1040.66 561.9
CCL17747 (BN171_1750008)
 5.35 11.0 9.36 8.66 3.99 16.76 110.57 0.73 302.45 142.3 84.62 105.72 165.54 5.58 1.53 56.47 309.15 0.43 69.36 4.85 11.71 14.27 157.52 98.08 48.71 0.99 5.86 693.88 66.55
CCL17748 (BN171_1750009)
 62.43 139.96 120.17 220.44 66.18 9.99 132.8 4.56 3556.6 105.66 75.31 85.38 220.04 24.66 34.73 64.29 1037.87 11.87 293.51 43.49 193.95 148.78 387.56 862.98 419.31 11.33 331.72 1172.24 50.23
CCL17775 (BN171_1790004)
 62.46 68.25 60.41 62.62 46.97 72.63 308.37 25.68 72.57 302.35 196.63 192.01 113.34 13.67 33.41 101.29 87.02 31.87 119.9 29.83 31.68 25.09 352.39 174.98 66.23 11.19 150.68 208.64 172.28
CCL17776 (pgm)
 93.67 185.48 97.5 146.31 84.31 82.98 449.85 77.62 117.68 319.9 284.89 302.97 161.11 22.14 97.05 122.87 154.96 67.77 215.29 94.73 85.34 141.77 501.94 351.09 100.27 39.23 368.52 322.85 296.55
CCL17827 (BN171_1830001)
 19.26 64.24 20.44 34.56 12.86 7.1 261.6 19.59 27.38 173.58 92.82 143.23 66.25 8.58 45.55 9.94 46.33 17.47 69.1 11.82 55.49 34.86 73.3 47.12 7.44 3.17 156.87 46.22 107.86
CCL17828 (BN171_1830002)
 133.87 512.61 184.31 477.98 318.93 94.96 1247.65 390.88 2209.46 877.88 973.67 1375.89 1144.08 22.61 539.87 123.01 2230.22 392.85 1870.31 82.87 221.71 684.73 1901.25 2165.13 183.74 87.62 2150.13 1240.34 1542.08
CCL18019 (BN171_2030005)
 46.86 13.11 265.22 112.16 121.41 127.95 1584.47 11.85 336.6 1652.78 1321.0 1883.72 494.4 23.17 24.13 235.99 2507.8 40.61 1562.57 126.88 59.41 22.12 3261.44 2182.01 309.65 23.21 405.46 1663.53 3302.4
CCL18143 (BN171_2120003)
 7.49 5.62 8.07 6.32 4.1 14.65 21.43 2.41 38.02 14.18 8.63 12.93 21.66 11.32 7.41 9.26 13.74 4.39 18.61 12.37 18.09 0.0 15.76 13.9 13.42 3.81 16.02 60.33 13.29
CCL18185 (lexA)
 997.12 952.45 361.86 467.12 379.15 226.39 516.12 396.74 1333.56 450.15 654.08 521.91 499.97 531.5 618.76 477.16 495.06 533.43 477.46 585.24 488.95 650.53 595.21 739.23 550.15 342.18 314.24 907.09 480.28
CCL18199 (BN171_2150013)
 1225.18 1435.02 1158.29 963.83 939.51 1220.54 5460.94 1467.88 2221.68 4118.56 5622.99 5794.03 2008.71 464.57 1134.14 2235.74 6438.75 1340.79 3160.31 959.22 478.74 1351.58 4222.87 10996.03 2633.29 786.28 2003.63 4530.6 6454.4
CCL18359 (BN171_2230009)
 4.7 3.13 10.56 12.03 4.89 22.36 53.74 1.45 37.0 50.28 47.57 47.19 34.69 4.1 3.17 44.85 15.43 2.24 22.95 13.03 12.37 10.66 41.89 26.12 34.01 5.26 41.54 46.59 30.5
CCL18386 (BN171_2280002)
 170.0 47.24 143.76 109.29 167.17 176.72 998.01 64.98 714.97 775.71 525.91 571.63 379.21 154.52 31.29 449.01 298.86 153.14 224.56 189.37 60.55 273.83 293.73 375.17 303.23 169.48 894.12 258.08 357.61
CCL18493 (BN171_2390012)
 268.34 115.88 194.9 159.41 130.37 112.35 257.61 84.41 128.16 175.59 188.5 207.38 179.74 203.69 125.98 192.65 115.07 146.82 198.63 160.47 76.27 266.54 294.93 341.33 122.0 80.21 149.8 234.84 175.97
CCL18654 (BN171_2480029)
 35.24 29.55 44.08 48.62 31.62 39.17 89.13 15.24 192.25 92.5 82.9 68.74 108.76 51.96 39.1 80.85 34.58 25.61 54.57 70.71 79.05 23.28 87.23 89.19 57.54 37.79 54.15 123.79 60.47
CCL18924 (BN171_2720024)
 6.92 46.97 8.52 56.71 9.69 25.2 423.79 3.65 502.9 593.83 230.66 88.13 47.94 1.62 3.54 61.37 191.0 1.01 116.9 20.46 87.21 13.93 131.14 263.41 87.99 7.41 421.6 57.43 58.09
CCL19142 (BN171_2880009)
 0.7 0.99 0.68 2.65 0.98 0.24 4.05 0.58 3.33 2.17 2.25 2.52 3.06 0.71 1.05 2.44 1.75 0.87 2.07 0.38 1.35 0.25 4.57 3.53 1.87 0.25 2.78 2.83 0.45
CCL19185 (BN171_2920006)
 0.43 0.07 1.42 1.06 0.93 2.27 8.72 0.13 30.42 9.79 11.8 15.4 20.11 2.18 0.23 14.57 7.66 0.44 6.92 1.87 1.49 0.6 13.51 3.12 2.93 0.58 3.71 20.59 9.41
CCL19193 (glyA)
 947.36 40.5 901.02 107.33 153.53 924.88 965.1 171.78 78.33 889.97 675.16 685.32 194.12 419.94 15.94 264.63 424.27 286.66 444.06 990.13 78.58 273.84 1072.17 676.44 348.25 356.46 417.62 556.63 406.09
CCL19255 (BN171_3000018)
 950.38 693.11 812.16 867.89 664.22 540.31 262.09 490.71 1021.63 255.9 315.99 293.14 594.07 1114.12 675.92 749.51 752.44 603.12 522.36 960.72 451.97 500.88 681.8 400.18 483.85 445.32 879.14 1021.1 308.27
CCL19312 (BN171_3020024)
 16.1 39.82 14.23 28.92 8.87 27.3 310.04 9.16 702.44 212.03 99.55 153.1 144.16 5.63 13.75 136.83 119.65 9.5 149.66 14.67 22.57 150.43 180.4 512.3 125.55 3.99 655.18 49.63 42.16
CCL19315 (BN171_3020027)
 0.65 1.71 0.68 2.8 0.91 1.52 27.2 0.56 16.83 19.66 3.41 5.57 2.25 0.39 0.72 3.09 6.07 0.71 4.31 0.47 1.32 8.04 1.69 2.93 0.54 0.54 22.6 0.0 0.11
CCL19321 (BN171_3020033)
 1.39 7.36 6.85 26.7 4.45 6.46 355.14 0.24 329.25 167.73 71.59 78.5 47.32 2.12 4.52 20.39 59.92 1.08 55.14 8.9 122.22 18.19 55.35 101.01 25.58 1.51 314.93 19.35 20.87
CCL19441 (BN171_3150004)
 5.51 4.88 5.21 7.62 5.64 17.29 18.4 3.93 44.57 21.4 16.84 16.43 21.93 3.59 3.9 19.13 9.56 6.28 18.71 3.84 4.91 8.95 25.05 20.24 10.29 1.9 24.98 30.25 9.61
CCL19657 (BN171_3350006)
 24.22 11.11 24.59 15.75 13.31 69.8 82.55 10.38 75.93 99.52 97.05 83.48 145.21 16.73 8.66 191.72 42.65 13.68 145.82 26.91 23.65 7.82 185.49 119.73 155.96 11.86 201.8 209.41 68.92

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)