Heatmap: Cluster_36 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA49056 (VCV51_033831)
-0.58 -0.17 -0.99 -0.57 0.88 0.77 0.8 0.87 -0.95 0.33 -0.0 0.22 0.08 -0.38 -0.04 0.19 0.19 -0.25 -0.15 -0.92 -0.9 -0.95 -0.27
KNA49073 (VCV51_033846)
-0.5 -0.77 -1.13 -0.85 1.15 0.98 0.99 1.08 -0.73 0.29 -0.1 0.32 -0.09 -0.96 -0.14 0.2 0.53 -2.1 -1.92 -0.91 -1.05 -0.92 0.5
KNA49087 (VCV51_033816)
-1.81 -0.99 -1.72 -2.1 1.28 1.15 1.2 1.29 -2.2 0.63 0.71 0.06 0.32 -1.23 0.07 0.26 0.02 -0.23 -0.21 -2.68 -2.53 -2.55 -0.54
KNA49116 (VCV51_033804)
-0.76 0.25 -0.98 -1.64 0.53 0.51 0.48 0.53 -0.31 -0.47 0.09 0.28 -0.41 0.29 -0.05 0.25 0.36 0.09 0.06 -0.66 -0.39 -0.52 0.33
KNA49208 (VCV51_030327)
-1.03 0.7 -2.32 -1.69 1.49 0.83 1.12 1.27 -0.91 -1.12 0.43 -0.39 -0.76 0.8 -0.69 -0.26 -0.27 -0.86 -0.78 -0.94 -0.88 -0.98 -0.3
KNA49663 (VCV51_033779)
-1.96 1.43 -2.42 -2.14 1.15 0.87 1.0 1.2 -0.35 -1.78 -0.47 -0.31 -1.26 1.39 0.24 -0.36 -0.28 -3.12 -2.69 -0.52 -0.77 -0.65 -0.58
KNA49668 (VCV51_033784)
-1.02 -0.12 -1.46 -1.76 0.9 0.72 0.78 0.87 -0.64 -0.15 0.02 0.13 -0.76 -0.13 0.66 0.24 0.39 -0.38 -0.4 -0.97 -0.85 -0.42 0.38
KNA50264 (VCV51_033695)
-0.97 1.22 0.01 -1.07 0.82 0.65 0.62 0.8 -0.24 -0.92 0.45 -0.37 -0.98 1.28 -0.18 -0.62 -0.51 -2.17 -2.16 -0.51 -0.64 -0.48 -0.17
KNA50266 (CgtA)
-0.62 0.26 0.55 -0.29 -0.31 -0.15 0.09 -0.41 0.04 0.06 0.92 0.54 -0.57 0.45 0.93 -0.38 -0.44 -0.68 -0.58 -0.33 -0.49 -0.34 -0.15
KNA50302 (LolB)
-1.02 1.03 -2.11 -1.79 -0.37 -0.4 -0.34 -0.44 0.4 -0.9 0.09 0.94 -0.57 0.93 -0.47 0.61 0.36 -0.82 -0.59 -0.06 -0.29 0.14 0.87
KNA51882 (VCV51_033536)
-1.62 0.19 -2.2 -2.43 1.24 1.04 1.14 1.2 -1.05 -0.17 0.18 0.26 -0.33 0.05 0.58 -0.3 -0.36 -0.75 -0.52 -1.33 -1.43 -1.23 0.12
KNA52422 (VCV51_030198)
-0.87 0.48 -1.25 -1.43 1.03 0.83 0.81 0.82 -0.41 -0.3 0.38 0.06 -0.15 0.35 0.13 -0.28 0.01 -1.47 -1.28 -0.61 -0.49 -0.54 0.11
KNA52481 (VCV51_033398)
-0.68 -0.31 -1.8 -1.19 1.05 0.84 0.89 0.97 -1.0 -0.27 0.6 0.22 -0.21 -0.04 0.38 -0.01 0.1 -0.86 -0.87 -1.1 -1.24 -1.1 0.57
KNA52705 (VCV51_033387)
-1.16 0.69 -1.18 -1.31 0.92 0.72 0.67 0.9 0.07 -0.61 -0.19 0.21 -0.75 0.5 -0.75 0.26 -0.01 -1.18 -1.04 -0.12 -0.95 -0.17 0.39
KNA52707 (VCV51_033389)
-0.83 0.11 -1.28 -0.89 0.15 0.31 0.38 0.23 0.21 -0.03 0.56 0.49 -0.37 0.16 0.14 0.02 -0.36 -0.99 -0.71 -0.08 0.08 -0.11 0.8
KNA53051 (VCV51_031581)
-1.46 1.0 -2.61 -2.04 0.63 0.32 0.21 0.4 -1.21 -0.66 1.42 1.1 -0.35 1.15 0.88 -0.52 -1.22 -1.53 -1.25 -1.43 -1.28 -1.19 0.18
KNA53373 (VCV51_030114)
-0.53 0.67 -0.44 -0.52 0.25 0.17 0.18 0.2 0.07 -0.13 0.42 0.67 -0.56 0.41 0.79 -0.35 -0.13 -1.2 -1.23 -0.22 -0.4 -0.19 0.03
KNA53856 (VCV51_030794)
-0.84 0.6 -1.67 -1.45 0.32 0.25 0.32 0.3 0.41 -0.86 -0.12 0.56 -0.73 0.58 0.44 -0.04 -0.3 -0.22 -0.06 0.12 -0.2 0.26 -0.24
KNA54825 (VCV51_031694)
-1.31 -0.91 -0.54 -1.51 1.21 1.26 1.22 1.26 -1.84 0.76 -0.05 -0.51 0.83 -1.13 -0.74 0.19 -0.77 -1.57 -1.3 -1.85 -2.27 -2.08 0.94
KNA54907 (VCV51_031790)
-2.23 -0.74 -2.01 -2.89 1.29 1.19 1.04 1.29 -1.72 0.4 0.35 -0.27 -0.07 -0.9 -0.79 -1.29 -1.22 -0.1 0.3 -2.06 -1.79 -1.89 1.58
KNA54916 (VCV51_033137)
-1.29 0.06 -0.64 -1.64 1.21 1.07 1.04 1.18 -1.3 -0.22 0.18 0.42 -0.52 -0.12 0.35 -0.51 -0.35 -1.22 -1.1 -1.51 -1.39 -1.36 0.79
KNA55000 (VCV51_033183)
-1.31 0.12 -0.66 -1.57 1.13 1.12 1.17 1.07 -1.51 -0.2 1.58 0.65 -0.93 -0.03 -0.93 -1.42 -2.01 -1.37 -1.05 -1.64 -1.49 -1.54 0.59
KNA55003 (VCV51_031733)
-1.07 1.08 -0.34 -1.02 0.04 0.13 0.1 0.02 -0.33 -0.34 0.96 0.98 -1.01 0.84 0.7 -0.56 -0.99 -0.86 -0.77 -0.6 -0.89 -0.47 0.34
KNA55241 (VCV51_031086)
-0.47 0.55 -1.55 -1.01 0.09 0.34 0.39 -0.18 0.02 -1.27 0.52 0.89 -0.97 0.4 -0.42 0.11 -0.04 -0.68 -0.45 0.02 -0.52 0.47 0.73
KNA55248 (VCV51_033061)
-0.88 0.91 -1.63 -1.43 0.37 0.48 0.54 0.31 -0.2 -0.87 0.31 0.63 -1.16 0.83 0.41 -0.36 -0.67 -0.47 -0.33 -0.43 -0.27 -0.07 0.39
KNA55258 (VCV51_033071)
-1.08 0.53 -1.35 -1.26 0.6 0.63 0.65 0.7 -0.09 -1.11 1.28 0.53 -1.28 0.51 0.9 -0.55 -1.0 -1.16 -0.9 -0.52 -0.94 -0.32 -0.26
KNA55279 (VCV51_033092)
-2.02 -0.82 -2.66 -2.51 1.57 1.53 1.67 1.66 -2.11 -0.27 0.71 -0.26 -0.77 -0.79 0.32 -0.0 -0.44 -0.87 -1.36 -2.35 -2.38 -2.14 -1.28
KNA55286 (VCV51_033099)
-1.6 0.93 -2.05 -1.97 0.51 0.5 0.67 0.46 0.05 -1.66 0.45 -0.23 -0.84 0.85 0.3 -0.36 -0.59 -0.16 0.09 -0.15 -0.49 -0.29 0.54
KNA55294 (VCV51_033107)
-0.39 0.34 -1.28 -1.1 -0.14 -0.32 -0.22 -0.29 0.03 -0.6 -0.22 1.43 -0.65 0.33 0.45 0.02 -0.15 -0.39 -0.11 -0.14 0.11 0.25 0.53
KNA55687 (QueE)
-1.12 0.9 -1.49 -1.28 0.46 0.41 0.44 0.44 0.35 -0.92 0.59 0.3 -1.79 0.76 1.36 -0.78 -1.1 -0.9 -0.76 -0.1 -0.38 0.05 -1.01
KNA56166 (VCV51_032992)
-0.88 -0.12 -1.31 -1.27 1.15 1.03 1.0 1.16 -1.04 -0.46 0.84 0.74 -0.59 -0.24 0.07 -0.25 -0.57 -1.37 -1.32 -1.24 -1.27 -1.2 0.5
KNA56238 (VCV51_030706)
-0.27 0.07 -1.65 -1.21 0.54 0.23 0.51 0.54 -0.31 -0.7 1.06 1.0 -1.0 0.29 -0.06 -0.06 -0.43 -0.67 -0.31 -0.46 -0.59 0.16 0.05
KNA56239 (VCV51_032975)
-0.16 0.24 -1.44 -0.97 0.88 0.67 0.65 0.88 0.17 -0.78 0.19 -0.11 -0.93 0.24 -0.44 0.56 0.4 -1.74 -1.57 -0.16 -0.38 0.27 -0.57
KNA56293 (VCV51_030612)
-0.88 0.9 -1.48 -1.73 0.1 0.13 0.2 0.07 -0.27 -0.03 -0.03 0.46 -0.29 0.92 0.21 0.13 -0.1 -0.21 -0.11 -0.48 -0.24 0.03 0.2
KNA56298 (VCV51_032902)
-0.54 -0.21 -1.35 -1.01 0.49 0.43 0.32 0.5 -0.58 0.17 0.35 0.19 -0.11 -0.19 0.51 0.37 0.19 -0.45 -0.33 -0.73 -0.6 -0.49 0.82
KNA56882 (VCV51_030517)
-3.77 2.03 -5.02 -5.58 1.32 0.58 0.11 1.39 -3.88 -4.89 0.18 0.32 -2.91 2.04 0.21 -3.01 -2.81 -2.03 -1.95 -3.87 -3.06 -2.82 1.08
KNA57464 (VCV51_032850)
-1.43 -0.54 -2.07 -2.39 0.73 1.17 1.21 0.55 -1.15 0.83 0.28 0.01 0.29 -0.65 -0.12 0.3 0.27 -0.17 0.1 -1.46 -1.51 -1.23 0.07
KNA57467 (VCV51_030453)
-2.33 -1.16 -3.24 -3.23 1.59 1.69 1.84 1.61 -1.69 -0.95 -0.3 0.35 -0.67 -1.43 -0.98 0.43 -0.04 -0.5 -0.31 -1.97 -1.95 -1.26 -3.62
KNA57468 (VCV51_030454)
-0.21 -1.25 -1.09 -0.66 0.84 0.8 0.98 0.85 -0.28 -0.35 -0.39 0.68 -0.21 -1.51 -0.81 0.47 0.37 -0.35 -0.11 -0.42 -0.83 -0.15 -0.09
KNA58252 (VCV51_032760)
-0.7 0.49 -1.26 -1.52 0.55 0.54 0.63 0.38 -0.02 -0.81 -0.72 0.69 -0.98 0.36 -0.06 0.28 -0.1 -0.66 -0.3 -0.1 -0.94 0.29 0.71
KNA58253 (VCV51_032761)
-0.85 0.66 -1.09 -1.54 0.48 0.48 0.57 0.3 -0.63 -0.45 -0.75 0.45 -0.84 0.52 0.44 0.58 0.17 -0.38 -0.09 -0.51 -1.22 -0.1 0.56
KNA58610 (VCV51_031101)
-0.67 0.68 -2.09 -1.64 0.99 1.0 1.65 1.17 -0.95 -1.49 -0.0 -0.1 -1.86 1.21 -0.4 -0.55 -0.62 -1.26 -1.19 -1.0 -1.25 -0.61 -0.1
KNA58919 (VCV51_032609)
-0.45 -0.2 -1.09 -1.15 0.96 0.74 0.67 0.99 -0.65 -0.4 0.57 0.02 -0.64 -0.28 -0.29 0.19 0.01 -0.46 -0.31 -0.71 -0.86 -0.6 0.69
KNA58929 (VCV51_032619)
-0.82 0.51 -0.27 -1.23 0.78 0.38 0.5 0.55 -0.74 0.03 0.28 -0.14 -0.27 0.41 -0.07 0.11 -0.26 -0.11 -0.03 -0.93 -0.91 -0.85 0.65
KNA59589 (VCV51_032517)
-1.47 0.09 -1.19 -1.9 1.2 1.05 1.11 1.12 -1.2 -0.09 0.12 0.2 -0.11 0.08 0.09 -0.18 -0.47 -0.71 -0.76 -1.29 -1.51 -1.22 0.6
KNA59590 (VCV51_032518)
-0.48 0.11 -0.17 -1.08 1.07 1.01 1.08 1.03 -0.72 0.23 0.47 0.15 0.13 0.12 -0.29 -1.37 -1.28 -0.38 -0.47 -0.69 -0.78 -0.65 -2.67
KNA59592 (VCV51_032520)
-1.11 0.12 -1.71 -1.7 0.66 0.56 0.64 0.62 -0.08 0.1 -0.01 0.27 0.13 -0.03 0.06 0.01 -0.26 -0.52 -0.32 -0.24 -0.4 -0.16 0.59
KNA59877 (VCV51_032288)
-1.35 1.53 -1.43 -1.16 0.68 0.92 0.98 0.7 -1.02 -0.43 0.55 0.31 -0.68 1.54 0.25 -0.77 -0.54 -2.03 -1.56 -1.49 -1.38 -1.42 -2.52
KNA59889 (VCV51_032300)
-1.95 -0.49 -2.8 -2.06 1.51 1.51 1.5 1.49 -1.08 0.48 -2.23 -0.58 0.58 -0.47 -0.55 -0.3 0.32 -1.61 -1.5 -1.38 -1.47 -1.25 -0.41
KNA60536 (VCV51_032207)
-1.72 0.86 -2.62 -2.27 1.43 1.08 1.21 1.28 -1.94 -0.16 -0.1 0.08 0.03 0.82 0.66 -1.13 -0.83 -1.77 -1.72 -2.08 -2.26 -2.11 0.21
KNA60537 (VCV51_032208)
-1.53 1.55 -2.66 -2.32 1.38 0.98 1.15 1.02 -1.22 -0.44 0.32 -0.26 -0.11 1.61 -0.43 -1.74 -1.42 -1.34 -1.44 -1.37 -1.6 -1.41 -5.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.