Heatmap: Cluster_2 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA47915 (VCV51_033862)
-5.69 -4.22 -4.13 -6.32 2.47 2.21 2.33 2.22 -3.76 -5.27 0.17 -1.59 -6.8 -4.31 0.02 -4.56 -5.3 -4.69 -5.55 -3.83 -4.07 -3.53 -4.52
KNA47916 (VCV51_033863)
-1.89 -2.58 -3.14 -2.55 1.92 1.65 2.01 1.86 -1.32 -2.63 0.46 0.19 -2.9 -2.66 -0.24 -2.58 -1.75 -0.64 -0.79 -1.45 -0.63 -0.87 -2.02
KNA47917 (VCV51_033865)
-3.17 -3.17 -3.42 -3.51 1.94 1.5 1.81 1.85 -2.93 -2.82 1.09 0.28 -3.49 -3.23 1.73 -3.77 -3.31 -1.22 -1.65 -2.76 -3.0 -2.73 -1.59
KNA47918 (VCV51_033866)
-1.86 -2.16 -2.35 -2.47 1.58 1.29 1.62 1.46 -1.46 -1.13 0.41 0.54 -1.73 -2.09 1.23 -1.64 -1.09 -0.06 -1.15 -1.3 -0.4 -1.11 -0.85
KNA47919 (VCV51_033867)
-5.48 -6.78 -6.58 -5.73 2.73 2.2 2.39 2.56 -5.06 -5.3 -2.84 -4.65 -5.5 -6.89 -4.38 -6.12 -5.56 -4.45 -4.44 -5.13 -5.15 -5.04 -5.08
KNA47920 (VCV51_033868)
-2.85 -4.0 -3.86 -3.9 2.53 2.15 2.26 2.37 -2.31 -2.82 -1.59 -3.7 -3.03 -3.96 -3.71 -3.94 -2.54 -2.03 -1.84 -2.89 -2.27 -2.46 -2.53
KNA49075 (VCV51_033848)
-2.7 -0.82 -0.82 -3.08 2.02 2.14 2.25 1.97 -2.39 -2.14 -3.62 -0.74 -3.56 -0.52 -2.63 -0.34 -0.36 -3.24 -2.98 -2.92 -3.39 -2.35 -2.48
KNA49076 (VCV51_033849)
-2.73 -0.83 -0.71 -3.42 1.98 2.07 2.22 1.88 -2.85 -1.48 -3.55 -0.24 -2.77 -0.87 -0.84 -0.53 -0.67 -1.91 -1.85 -2.91 -3.27 -2.2 -3.23
KNA49077 (VCV51_033850)
-2.09 -1.56 -0.84 -2.32 2.09 2.09 2.13 2.06 -2.44 -2.42 -3.86 -1.18 -3.54 -1.64 -1.21 -0.15 -0.13 -2.82 -2.91 -2.37 -2.58 -2.14 -2.27
KNA49223 (VCV51_030343)
-1.1 -1.6 -0.62 -3.56 1.84 2.1 2.19 1.86 -2.62 -1.87 -2.88 -0.36 -2.48 -1.48 -2.32 -0.39 -0.61 -2.08 -1.79 -2.38 -2.45 -0.35 -2.12
KNA49224 (VCV51_030344)
-0.29 -1.23 -0.29 -2.15 1.75 1.69 1.78 1.67 -2.27 -1.15 -2.53 0.63 -1.77 -1.33 -1.44 -0.05 -0.06 -2.0 -1.88 -2.19 -2.17 -0.43 -1.21
KNA49225 (VCV51_030345)
-0.35 -0.37 -0.11 -2.16 1.62 1.62 1.83 1.45 -1.77 -1.36 -2.19 0.22 -2.05 -0.33 -1.98 -0.2 -0.32 -1.51 -1.3 -1.65 -1.67 0.03 -1.33
KNA49226 (VCV51_030346)
-0.58 -1.43 0.18 -1.91 1.77 1.87 1.9 1.72 -2.41 -1.3 -2.44 -0.44 -1.72 -1.3 -1.59 -0.55 -0.53 -0.84 -0.81 -2.12 -2.08 -0.86 -1.37
KNA50220 (VCV51_030255)
-1.25 -1.19 -1.93 -1.85 1.44 1.43 1.35 1.66 -1.08 -0.3 -0.83 -0.31 -0.02 -1.25 0.01 0.07 0.19 -0.71 -0.51 -1.15 -0.98 -0.9 -1.22
KNA51533 (VCV51_033573)
-0.86 -1.07 -1.14 -0.85 1.74 1.41 1.38 1.66 -0.6 -0.76 -0.61 0.25 -1.01 -1.22 -1.44 -1.5 -1.0 -0.66 -0.66 -0.74 -0.75 -0.7 -0.21
KNA51678 (VCV51_031484)
-2.09 -2.87 -3.71 -2.49 2.33 1.73 2.44 1.93 -1.61 -2.4 -0.51 -1.54 -1.78 -2.82 -1.2 -1.49 -1.81 -1.78 -1.95 -1.72 -1.82 -1.76 -1.78
KNA51679 (VCV51_031483)
-3.27 -3.01 -3.78 -3.66 2.64 1.84 2.1 2.13 -2.82 -2.56 -0.25 -1.97 -2.88 -2.81 -0.48 -2.19 -2.53 -1.11 -1.79 -2.77 -2.68 -2.72 -2.6
KNA51680 (VCV51_031482)
-1.73 -2.63 -2.47 -2.1 2.07 1.29 1.91 1.83 -1.51 -1.49 -0.33 -0.7 -1.52 -2.61 0.55 -0.66 -0.99 -0.33 -0.78 -1.42 -1.52 -1.33 -1.21
KNA51861 (VCV51_033535)
-4.27 -4.24 -2.97 -5.14 2.33 2.17 2.27 2.31 -2.99 -2.32 -0.72 -1.38 -3.75 -4.49 -1.26 -0.99 -1.46 -2.8 -4.11 -2.73 -3.19 -2.54 -3.47
KNA53743 (VCV51_033269)
-1.3 -1.23 -2.03 -1.53 1.62 1.12 1.44 1.61 -1.58 -0.63 -1.02 0.54 -1.16 -1.03 -0.48 0.72 0.82 -0.99 -0.92 -1.9 -1.85 -1.65 -0.57
KNA53744 (VCV51_033270)
-1.04 -0.31 -2.25 -1.31 1.27 0.69 1.04 1.14 -0.78 -0.48 -1.05 0.42 -1.17 -0.16 -1.07 1.14 1.16 -0.81 -0.82 -0.97 -1.13 -0.82 -0.39
KNA53745 (VCV51_033271)
-2.04 -1.35 -3.99 -3.41 2.28 1.63 2.0 2.22 -2.37 -2.92 -1.49 -1.02 -2.57 -1.04 -2.16 0.37 0.25 -4.45 -3.52 -2.43 -2.63 -1.76 -1.78
KNA53839 (VCV51_033229)
-1.38 -2.15 -1.56 -1.72 1.73 1.85 2.0 1.72 -1.65 -0.42 -1.39 -0.91 -1.18 -2.43 -0.73 -1.81 -1.5 0.12 -0.31 -1.44 -1.58 -1.17 -0.72
KNA53840 (VCV51_030781)
-2.17 -1.23 -3.11 -2.9 2.01 2.05 2.17 2.0 -2.28 -1.02 -2.02 -0.42 -1.66 -1.37 -1.91 -1.36 -1.6 -1.15 -1.07 -2.3 -2.42 -2.17 -0.93
KNA53841 (VCV51_033230)
-1.45 -0.78 -2.69 -1.85 1.82 1.75 1.86 1.83 -2.08 -0.81 -2.03 -0.33 -1.42 -0.89 -0.67 -0.56 -0.83 -0.53 -0.39 -2.09 -1.74 -1.65 -0.68
KNA54885 (VCV51_031806)
-1.3 -2.37 -2.6 -1.88 1.97 1.05 1.89 1.7 -1.65 -2.89 1.14 -0.79 -2.1 -2.72 -0.02 -1.05 -0.8 -0.28 -1.03 -1.39 -1.68 -1.34 -0.1
KNA54893 (VCV51_031800)
-2.22 -3.85 -3.33 -2.04 2.15 2.24 2.15 2.34 -2.09 -1.48 -3.12 -1.85 -1.97 -3.78 -2.31 -2.75 -2.48 -1.48 -1.29 -2.35 -2.56 -2.11 -0.99
KNA55006 (VCV51_031731)
-3.07 -1.32 0.45 -3.86 2.01 2.16 2.24 2.04 -4.21 -2.43 -3.7 0.21 -3.64 -1.26 -2.26 -0.74 -1.68 -3.79 -3.18 -3.96 -4.69 -3.33 -2.28
KNA55007 (VCV51_031730)
-3.97 -1.56 -0.23 -4.96 2.24 2.32 2.34 2.3 -4.79 -3.13 -5.39 -1.02 -5.07 -1.52 -3.75 -1.34 -2.41 -4.82 -4.39 -4.55 -4.92 -3.57 -4.24
KNA55008 (VCV51_031729)
-2.53 -1.09 0.39 -2.99 2.08 2.1 2.16 2.02 -3.33 -2.06 -4.1 -0.03 -3.01 -1.14 -2.48 -0.9 -1.62 -2.5 -2.33 -3.21 -3.29 -2.58 -2.83
KNA55009 (VCV51_033186)
-2.1 -2.5 0.08 -2.24 1.93 2.21 2.25 1.95 -2.56 -1.96 -3.6 0.03 -2.97 -2.64 -1.81 -0.69 -1.35 -2.88 -2.68 -2.63 -2.54 -2.29 -1.71
KNA55233 (VCV51_031078)
-3.67 -2.22 -3.49 -4.1 2.3 1.83 2.13 2.18 -2.75 -2.4 0.46 -0.41 -2.99 -2.24 0.22 -2.8 -3.4 -1.89 -2.88 -2.84 -3.03 -2.65 -2.66
KNA55234 (VCV51_031079)
-3.25 -2.46 -3.39 -3.84 2.11 1.65 1.96 1.95 -2.1 -1.84 0.61 0.17 -2.73 -2.41 0.84 -1.81 -2.48 -1.1 -2.02 -2.01 -2.29 -1.88 -2.88
KNA55235 (VCV51_031080)
-2.12 -2.15 -2.71 -2.08 1.91 1.45 1.76 1.76 -0.8 -1.42 0.48 -0.34 -2.51 -2.28 1.15 -1.73 -2.08 -0.8 -1.62 -0.9 -1.19 -0.82 -2.56
KNA55236 (VCV51_031081)
-1.56 -2.69 -2.2 -1.21 1.87 1.3 1.66 1.66 -0.91 -1.0 0.32 -0.31 -2.0 -2.72 1.01 -0.96 -1.38 -0.25 -1.02 -0.97 -1.23 -0.88 -2.31
KNA55238 (VCV51_031083)
-1.44 -2.44 -2.04 -1.42 1.77 1.34 1.53 1.66 -0.85 -1.29 -0.12 0.16 -2.15 -2.49 0.87 -0.27 -0.44 -0.44 -1.14 -0.82 -1.17 -0.75 -1.88
KNA55340 (VCV51_033037)
-1.4 -2.86 -3.06 -1.29 2.06 1.74 1.66 2.2 -0.66 -0.13 -2.32 -1.29 -0.13 -2.76 -2.37 -0.53 -0.82 -2.06 -1.82 -1.02 -1.35 -1.09 -2.72
KNA55375 (VCV51_033049)
-1.34 -1.65 -2.1 -1.34 2.24 1.08 1.82 1.72 -0.67 -1.33 -0.22 -1.07 -1.35 -1.88 -1.25 -0.42 -0.71 -0.43 -0.71 -1.06 -1.47 -0.6 -1.56
KNA56157 (VCV51_030896)
-3.93 -1.7 -3.81 -4.54 2.31 2.25 2.16 2.14 -3.49 -2.85 -1.77 -0.07 -3.72 -1.64 -1.34 -1.16 -1.41 -2.38 -2.03 -3.63 -3.72 -3.38 -2.54
KNA56295 (VCV51_030615)
-3.91 -2.61 -5.27 -4.79 2.43 2.09 2.06 2.49 -3.64 -1.37 -2.46 -1.38 -1.56 -2.67 -3.58 -0.86 -1.21 -2.96 -2.6 -3.71 -3.65 -3.52 -2.76
KNA56296 (VCV51_030616)
-2.06 -1.42 -1.95 -2.21 1.99 1.8 1.71 2.1 -2.12 -0.4 -1.87 -0.7 -0.91 -1.5 -0.54 -0.17 -0.61 -1.4 -1.38 -2.29 -2.36 -2.06 -0.94
KNA56297 (VCV51_030617)
-2.21 -1.21 -3.28 -2.57 2.03 1.94 1.83 2.18 -2.23 -0.64 -1.42 -0.74 -1.01 -1.18 -0.3 -0.7 -1.08 -2.29 -2.19 -2.44 -2.52 -2.01 -1.5
KNA56380 (VCV51_030668)
-2.14 -1.49 -2.79 -2.88 1.92 1.62 1.73 1.96 -2.16 -0.04 -0.76 -0.49 -0.22 -1.71 -1.63 -0.08 -0.52 -0.86 -0.73 -2.28 -2.27 -1.95 -0.74
KNA56404 (VCV51_032963)
-2.36 -0.99 -0.38 -3.81 1.8 1.87 1.91 1.71 -2.1 -1.42 -2.19 -0.56 -1.75 -0.94 -3.16 0.52 0.2 -1.03 -0.91 -1.92 -2.26 -1.39 -1.28
KNA56885 (VCV51_030520)
-2.34 -2.14 -2.42 -2.53 1.73 1.26 1.85 1.36 -1.54 -1.5 0.9 0.32 -1.16 -1.69 0.54 -0.48 -0.84 -0.23 -0.5 -1.63 -1.16 -1.26 -1.76
KNA56886 (VCV51_030521)
-4.11 -3.58 -2.72 -4.31 2.45 1.66 2.57 1.73 -2.94 -1.83 0.22 -0.87 -1.83 -3.36 -0.18 -2.01 -2.02 -2.19 -2.55 -3.08 -3.0 -2.46 -3.35
KNA56887 (VCV51_030522)
-2.16 -2.23 -1.83 -2.43 1.92 1.47 1.98 1.65 -1.33 -1.35 0.13 -1.0 -1.49 -2.19 -0.27 -1.12 -1.0 -0.05 -0.2 -0.93 -1.15 -0.91 -1.5
KNA56888 (VCV51_030523)
-1.67 -3.4 -1.93 -1.76 2.04 1.57 1.93 1.74 -0.79 -1.71 -0.81 -1.38 -2.12 -3.37 -1.38 -0.86 -0.57 0.26 -0.36 -0.79 -0.77 -0.5 -2.37
KNA56889 (VCV51_030524)
-1.47 -2.61 -0.7 -1.58 1.82 1.02 1.61 1.22 -0.65 -1.27 -0.65 0.09 -2.02 -2.97 -1.29 -1.11 -1.05 1.13 0.45 -0.67 -0.61 -0.26 -1.23
KNA56890 (VCV51_030525)
-1.17 -2.82 -0.93 -1.56 1.53 1.03 1.38 1.31 -0.85 -0.96 -0.68 -0.23 -1.58 -2.88 -0.83 -0.93 -0.62 1.52 0.76 -0.76 -1.01 -0.4 -1.37
KNA57816 (VCV51_032785)
-1.96 -3.11 -2.52 -2.71 2.14 1.79 1.88 2.03 -0.87 -0.93 -2.09 -0.47 -1.09 -3.07 -4.24 -1.52 -1.93 -1.18 -0.75 -1.05 -1.21 -1.06 -0.06
KNA57853 (VCV51_032777)
-1.39 -1.73 -1.87 -1.48 1.79 1.52 1.68 1.86 -0.47 -1.04 -2.01 -1.01 -0.08 -1.93 -2.18 0.47 -0.16 -1.81 -1.69 -0.56 -1.13 -1.21 -0.54
KNA58565 (VCV51_031138)
-2.3 -7.62 -3.87 -3.42 2.3 2.54 2.41 2.29 -3.4 -2.1 -5.67 -2.39 -3.52 -7.97 -5.48 -3.03 -3.61 -3.21 -1.73 -3.34 -3.21 -2.56 -3.83
KNA58579 (VCV51_031127)
-2.68 -3.58 -3.06 -3.23 2.45 1.7 2.18 2.15 -2.19 -2.49 -0.66 -0.88 -2.73 -3.59 -0.39 -1.23 -1.91 -1.3 -2.4 -2.36 -2.46 -1.96 -1.72
KNA58924 (OmpT)
-1.72 -7.35 -3.94 -1.68 2.29 2.34 2.22 2.07 -1.9 0.4 -3.99 -0.55 -2.15 -7.37 -5.42 -3.29 -3.79 -5.67 -5.52 -1.94 -2.56 -2.2 -4.59
KNA59324 (VCV51_031350)
-1.54 -4.97 -1.82 -1.2 2.26 2.12 2.35 2.33 -0.9 -3.05 -4.55 -2.89 -3.09 -4.58 -5.99 -3.05 -3.14 -3.93 -3.71 -1.36 -1.99 -1.46 -2.18
KNA59341 (VCV51_031338)
-2.14 -0.97 -2.96 -2.78 1.52 1.48 1.54 1.56 -1.08 -0.19 0.22 -0.59 -0.27 -0.82 -0.79 -0.42 -0.72 -0.29 -0.01 -1.67 -1.85 -1.36 0.23
KNA59927 (VCV51_032338)
-2.71 -3.49 -3.72 -3.16 2.35 1.64 2.09 2.22 -1.76 -2.87 -0.84 -1.05 -2.63 -3.41 0.52 -2.18 -1.8 -1.32 -1.5 -1.86 -2.05 -1.86 -2.11
KNA59928 (VCV51_032339)
-3.01 -3.48 -3.6 -3.98 2.45 1.61 2.16 2.17 -2.05 -3.44 -0.09 -0.53 -3.23 -3.65 0.7 -3.69 -3.06 -2.48 -2.6 -2.29 -2.4 -2.15 -2.2
KNA59933 (VCV51_032344)
-1.7 -3.23 -1.16 -1.61 2.24 2.04 1.96 2.15 -1.99 -0.93 -2.71 -1.29 -0.95 -3.33 -2.26 -2.36 -2.26 -1.63 -1.51 -2.06 -2.04 -2.03 -0.51
KNA59977 (VCV51_032389)
-2.12 -2.98 -3.45 -2.58 2.02 1.52 1.88 1.88 -1.63 -2.87 0.38 0.62 -3.22 -2.99 0.7 -1.41 -1.17 -0.67 -2.32 -1.75 -1.9 -1.54 -1.43
KNA59978 (VCV51_032390)
-4.06 -2.6 -3.92 -3.93 2.22 1.58 1.94 2.03 -3.06 -3.48 1.09 0.23 -3.48 -2.64 0.39 -3.6 -3.52 0.01 -2.23 -2.66 -3.1 -2.28 -3.02
KNA59979 (VCV51_032391)
-3.86 -2.75 -3.11 -4.4 2.25 1.8 2.05 2.16 -2.64 -3.8 0.49 -0.23 -4.05 -2.41 -0.52 -2.97 -3.18 -0.22 -1.71 -1.84 -2.57 -1.47 -3.4
KNA59981 (VCV51_032393)
-4.1 -3.15 -5.0 -4.49 2.34 1.87 2.27 2.11 -3.14 -3.38 -0.28 -0.56 -3.7 -2.95 -0.23 -3.69 -3.97 0.37 -2.35 -3.0 -3.39 -2.5 -3.22
KNA59983 (VCV51_032395)
-3.66 -2.76 -4.35 -3.7 2.04 1.7 1.92 1.96 -2.02 -3.95 0.63 -1.06 -3.85 -2.6 0.42 -2.63 -2.21 0.66 -0.09 -1.86 -2.46 -1.76 -3.72
KNA59984 (VCV51_032396)
-3.49 -4.55 -3.34 -3.3 2.23 1.73 1.92 2.16 -3.1 -3.79 0.23 -0.91 -2.87 -4.63 0.52 -4.22 -3.8 0.39 -0.03 -2.89 -3.29 -2.96 -2.9
KNA60909 (VCV51_031883)
-4.07 -5.16 -5.95 -5.07 2.68 1.48 2.21 2.67 -3.9 -6.4 0.42 -2.51 -6.39 -4.97 -0.43 -4.74 -4.93 -5.88 -6.48 -4.2 -4.48 -3.72 -4.82

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.