Heatmap: Cluster_8 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA49060 (VCV51_033835)
-1.42 1.62 -1.0 -1.33 -0.46 -0.21 -0.16 -0.34 0.2 -1.04 0.9 -0.01 -1.25 1.72 0.63 -0.04 -0.2 -2.14 -2.22 -0.02 -0.31 -0.01 -0.93
KNA49061 (VCV51_033836)
-1.26 1.74 -1.19 -1.09 -0.36 -0.11 -0.04 -0.27 0.16 -0.78 1.27 -1.19 -1.01 1.96 0.86 -1.63 -1.94 -1.66 -1.86 -0.12 -0.39 -0.12 -1.76
KNA49130 (VCV51_033810)
-2.21 0.91 -1.16 -2.43 0.44 0.48 0.49 0.52 -1.79 0.52 1.0 0.44 -0.17 0.86 1.31 0.36 0.12 -1.2 -1.05 -1.93 -2.07 -1.84 -1.44
KNA49131 (VCV51_033811)
-1.78 0.6 -0.93 -1.94 0.65 0.59 0.65 0.69 -1.74 0.21 0.81 0.63 -0.17 0.59 1.29 0.14 0.02 -0.87 -0.74 -2.04 -2.02 -1.9 -0.93
KNA49132 (VCV51_033812)
-2.21 1.61 -1.44 -2.52 0.26 0.2 0.27 0.29 -0.86 -0.45 0.86 -0.08 -0.67 1.55 0.79 0.16 0.07 -0.72 -0.58 -1.12 -1.18 -1.01 -1.95
KNA49134 (VCV51_033814)
-1.96 1.16 -1.92 -2.34 0.54 0.6 0.63 0.61 -0.56 -0.42 0.46 0.14 -0.35 1.4 0.56 -0.48 -0.57 -0.39 -0.46 -1.01 -0.86 -0.82 -0.51
KNA51823 (RimM)
-1.6 0.82 -0.74 -1.52 0.05 0.35 0.44 0.23 -0.45 0.18 0.75 0.76 -0.44 0.98 1.3 -0.06 -0.26 -1.74 -1.62 -0.77 -1.05 -0.66 -0.76
KNA51824 (VCV51_033511)
-1.83 0.92 -0.94 -1.65 -0.18 0.33 0.46 0.08 -0.36 0.22 0.84 0.97 -0.47 1.0 1.39 -0.28 -0.59 -1.89 -1.88 -0.65 -0.96 -0.53 -1.0
KNA51829 (VCV51_033517)
-1.54 1.31 -1.28 -1.64 0.15 0.29 0.34 0.24 0.39 -0.69 0.48 -0.06 -0.7 1.3 0.48 -0.28 -0.3 -1.82 -1.74 0.01 -0.32 0.17 -0.36
KNA52215 (VCV51_033473)
-0.47 0.61 0.06 -0.42 0.88 0.72 0.71 0.92 -0.78 -0.18 0.92 -3.09 -0.54 0.69 1.88 -7.67 -8.2 -1.51 -1.67 -0.73 -1.48 -0.8 -1.79
KNA52216 (VCV51_033474)
0.04 -0.73 0.07 0.37 1.02 0.88 0.78 1.05 -0.12 -0.57 0.48 -1.26 -0.61 -0.79 0.91 -0.54 -0.44 -2.06 -2.08 -0.18 -0.74 -0.23 -0.69
KNA52492 (VCV51_030150)
-0.47 0.51 -0.72 -0.45 1.24 1.06 0.98 1.26 -0.45 -0.07 1.27 - -0.8 0.75 -0.27 - - -2.49 -2.34 -0.26 -0.67 -0.22 -0.27
KNA52712 (VCV51_031518)
-1.78 0.58 -1.64 -1.77 0.6 0.71 0.8 0.71 -0.92 -0.16 0.81 0.59 -0.25 0.49 1.63 -0.02 -0.74 -2.05 -1.89 -1.19 -1.38 -1.09 -0.57
KNA53275 (VCV51_031625)
-1.89 1.63 -2.16 -1.9 0.51 0.41 0.47 0.64 -1.02 -0.6 0.54 0.77 -0.7 1.65 0.61 -0.61 -1.11 -0.71 -1.35 -1.32 -1.64 -1.1 -0.85
KNA54971 (VCV51_033154)
-1.97 1.05 -1.26 -1.93 0.78 0.72 0.7 0.88 -0.39 -0.29 0.98 0.19 -0.52 0.96 1.41 -2.16 -2.21 -1.91 -1.86 -0.69 -1.2 -0.4 -1.35
KNA54972 (VCV51_033155)
-2.53 1.35 -1.56 -2.59 0.53 0.54 0.58 0.63 -0.4 -0.42 0.99 0.64 -0.48 1.46 1.26 -2.16 -2.38 -2.0 -1.96 -0.78 -1.35 -0.47 -1.68
KNA54973 (VCV51_033156)
-2.35 0.75 -1.39 -2.42 0.54 0.59 0.65 0.66 -0.65 -0.06 1.2 0.99 -0.17 0.67 1.65 -1.52 -1.65 -1.73 -1.62 -1.02 -1.59 -0.68 -2.29
KNA54974 (VCV51_033157)
-2.56 1.78 -1.77 -2.77 -0.38 -0.29 -0.17 -0.32 0.22 -0.47 1.02 0.34 -0.57 1.87 1.34 -2.46 -2.55 -1.9 -1.99 -0.14 -0.67 0.18 -3.29
KNA54975 (VCV51_033158)
-2.26 1.38 -1.4 -2.4 -0.42 -0.01 0.16 -0.29 -0.18 0.42 1.17 0.89 -0.09 1.32 1.31 -1.81 -2.04 -1.29 -1.24 -0.52 -0.86 -0.18 -2.24
KNA54976 (VCV51_033159)
-2.2 2.17 -2.27 -2.43 -0.46 -0.29 -0.21 -0.37 -0.05 -0.13 0.92 -0.36 -0.71 2.23 0.14 -1.22 -1.83 -1.69 -1.83 -0.43 -0.78 -0.13 -2.28
KNA54977 (VCV51_033160)
-2.27 1.81 -1.91 -2.46 -0.21 -0.07 -0.01 -0.07 0.12 -0.27 1.22 -0.03 -0.61 1.84 0.72 -1.34 -1.95 -1.58 -1.73 -0.2 -0.62 0.05 -3.08
KNA54978 (VCV51_033161)
-1.97 1.0 -1.37 -2.07 0.33 0.41 0.45 0.47 -0.62 0.36 1.17 0.56 -0.15 0.97 1.46 -0.95 -1.61 -1.49 -1.55 -0.79 -1.09 -0.56 -2.13
KNA54979 (VCV51_033162)
-1.86 1.32 -1.92 -2.02 0.33 0.37 0.42 0.45 -0.94 0.22 1.19 0.66 -0.24 1.22 1.3 -0.61 -1.24 -1.55 -1.77 -1.23 -1.57 -0.95 -1.83
KNA54980 (VCV51_033163)
-2.11 1.58 -2.22 -2.47 0.64 0.61 0.69 0.71 -0.4 0.35 1.32 -0.7 -0.01 1.36 -0.28 -1.57 -1.97 -1.37 -1.39 -0.65 -1.1 -0.43 -1.66
KNA54981 (VCV51_033164)
-1.38 0.57 -1.54 -1.26 0.87 0.77 0.73 0.92 -0.79 0.92 0.76 0.15 0.38 0.56 1.34 -2.03 -2.65 -2.23 -2.42 -0.85 -1.15 -0.63 -1.99
KNA54982 (VCV51_033165)
-0.9 1.05 -0.17 -0.91 0.69 0.65 0.63 0.78 -0.46 -0.05 0.59 0.19 -0.44 0.8 0.5 -0.68 -0.98 -1.01 -0.81 -0.73 -1.08 -0.64 -1.42
KNA54983 (VCV51_033166)
-1.03 0.99 -0.58 -0.9 0.48 0.44 0.44 0.6 -0.15 -0.16 0.55 0.05 -0.53 0.98 0.94 -0.45 -0.76 -1.32 -1.19 -0.4 -0.82 -0.31 -0.91
KNA54984 (VCV51_033167)
-1.34 0.32 -0.7 -1.41 0.67 0.69 0.7 0.82 -0.33 0.39 0.73 0.56 -0.2 0.3 1.2 -0.89 -1.45 -1.05 -0.77 -0.68 -1.06 -0.56 -1.38
KNA54985 (VCV51_033168)
-1.39 0.89 -1.41 -1.43 0.63 0.7 0.73 0.77 -0.88 0.48 0.99 0.12 -0.08 0.83 1.24 -0.61 -1.2 -1.22 -1.0 -1.21 -1.61 -1.03 -3.18
KNA54986 (VCV51_033169)
-1.93 1.7 -1.57 -2.14 -0.22 -0.12 -0.04 -0.07 0.11 -0.67 0.77 -0.1 -0.8 1.9 0.75 -0.2 -0.78 -1.39 -1.22 -0.2 -0.72 -0.03 -2.55
KNA54987 (VCV51_033170)
-1.78 1.64 -1.37 -1.96 -0.02 0.16 0.28 0.13 -0.52 0.17 0.87 0.61 -0.31 1.61 0.74 -0.81 -1.44 -1.06 -0.92 -0.85 -1.37 -0.63 -1.83
KNA54988 (VCV51_033171)
-1.71 0.89 -1.07 -1.8 0.24 0.49 0.62 0.36 -0.63 0.61 1.04 1.09 0.07 0.69 1.29 -1.69 -2.61 -0.98 -0.83 -1.03 -1.52 -0.78 -2.06
KNA54989 (VCV51_033172)
-1.48 0.38 -1.08 -1.53 0.3 0.43 0.55 0.44 -0.7 0.4 1.1 1.11 0.1 0.29 1.5 -0.68 -1.3 -0.91 -0.85 -1.05 -1.51 -0.84 -2.02
KNA54990 (VCV51_033173)
-1.22 -0.11 -1.18 -1.7 0.78 0.94 1.11 0.91 -0.06 0.79 1.69 - 0.37 -0.39 -0.26 - - -0.18 -0.24 -0.23 -0.79 -0.06 -1.65
KNA54991 (VCV51_033174)
-0.91 1.45 -0.68 -0.93 -0.25 -0.15 -0.01 -0.06 0.23 -0.29 0.88 0.3 -0.61 1.5 0.88 -2.18 -2.74 -0.85 -1.04 -0.03 -0.39 0.11 -1.83
KNA54992 (VCV51_033175)
-0.6 0.75 -0.27 -0.58 -0.08 0.02 0.12 0.13 0.1 0.14 0.8 0.5 -0.44 0.69 0.99 -0.9 -1.29 -0.54 -0.76 -0.1 -0.31 0.02 -1.37
KNA54994 (VCV51_033177)
-0.95 0.34 -0.93 -1.04 0.25 0.52 0.58 0.35 -0.19 0.49 0.71 0.75 0.21 0.15 0.94 -0.78 -1.52 -0.45 -0.32 -0.58 -0.95 -0.42 -0.64
KNA54995 (VCV51_033178)
-1.57 1.21 -1.16 -1.79 -0.18 0.22 0.36 -0.04 -0.1 0.34 0.77 0.92 -0.01 1.16 0.62 -0.64 -1.17 -0.71 -0.6 -0.44 -0.93 -0.32 -1.61
KNA54996 (VCV51_033179)
-1.86 1.54 -1.66 -2.0 -0.2 -0.05 0.01 -0.05 0.34 -0.53 0.63 0.13 -0.63 1.74 1.02 -0.72 -1.33 -1.24 -1.21 0.01 -0.58 0.09 -2.13
KNA54997 (VCV51_033180)
-1.51 0.7 -1.23 -1.57 0.35 0.43 0.45 0.52 -0.34 0.13 0.69 0.58 -0.29 0.67 1.36 -0.12 -0.69 -1.1 -0.98 -0.63 -1.19 -0.53 -0.79
KNA54998 (VCV51_033181)
-1.79 0.37 -0.58 -1.84 0.7 0.72 0.74 0.86 -0.53 -0.11 0.86 0.21 -0.35 0.29 1.5 -0.23 -0.84 -1.46 -1.33 -0.77 -1.36 -0.7 -0.93
KNA56385 (VCV51_032949)
-1.89 0.34 -2.37 -2.59 1.31 1.07 1.1 1.47 -1.66 -0.87 1.43 - 0.02 0.71 1.23 - - -0.18 0.54 -2.23 -2.19 -1.74 -
KNA58149 (VCV51_032766)
-2.03 1.14 -2.25 -2.66 0.35 0.21 0.6 0.13 -1.5 0.14 0.47 0.71 -0.63 1.39 1.73 -0.31 -1.08 -0.55 -0.34 -1.72 -1.87 -1.43 -1.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.