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Heatmap: Cluster_4 (HCCA)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA44739 (VCV51_033941)
 276.51 64.17 129.62 146.0 39.94 42.15 41.92 20.82 250.95 115.0 80.75 0.0 88.27 68.92 5.05 0.0 0.0 110.93 109.11 202.86 315.86 343.28 20.46
KNA49227 (VCV51_030347)
 19.36 6.92 22.34 10.06 35.78 37.37 40.52 33.86 10.08 40.38 12.45 29.72 38.17 5.75 25.75 19.78 21.07 12.11 12.82 134.64 6.04 21.93 43.65
KNA49509 (VCV51_033794)
 7.34 13.48 3.37 6.41 9.77 11.32 9.79 9.84 6.68 7.33 12.06 10.47 8.56 14.34 2.8 15.95 14.87 11.59 12.27 33.07 7.0 6.3 14.39
KNA50226 (VCV51_033686)
 60.31 3.85 29.22 8.02 5.66 8.31 7.76 3.96 9.53 32.56 4.58 13.22 6.97 2.98 3.93 14.1 16.35 7.56 9.04 1588.97 15.24 109.52 17.36
KNA51840 (VCV51_030376)
 103.59 59.46 52.73 40.06 68.07 66.88 66.28 66.67 92.28 51.62 65.65 82.0 58.77 56.16 69.68 111.66 129.94 82.92 92.13 81.93 74.81 143.9 111.85
KNA51911 (VCV51_033501)
 276.51 64.17 129.62 146.0 39.94 42.15 41.92 20.82 250.95 115.0 80.75 0.0 88.27 68.92 5.05 0.0 0.0 110.93 109.11 202.86 315.86 343.28 20.46
KNA53342 (VCV51_031633)
 96.54 1.76 7.81 2.04 2.09 2.52 2.52 1.88 2.01 5.1 1.93 4.82 4.47 1.72 1.68 9.83 5.82 4.56 5.11 2.6 3.63 105.69 3.21
KNA53343 (PilB)
 183.54 2.28 9.71 6.7 2.21 2.8 2.63 1.98 6.96 5.1 2.58 4.48 4.85 2.09 3.44 8.76 6.16 12.89 12.82 8.25 7.2 265.7 11.61
KNA53630 (VCV51_033305)
 124.39 21.98 41.83 27.96 19.51 22.52 22.64 19.09 49.15 32.81 36.71 43.18 36.0 22.62 31.14 67.26 70.88 26.45 32.21 47.17 45.96 195.17 39.06
KNA53675 (VCV51_030030)
 150.89 7.93 50.76 8.73 5.21 5.88 6.59 4.53 11.85 13.55 9.02 15.2 16.01 7.98 8.12 15.32 18.62 12.18 13.15 37.08 28.43 292.24 14.3
KNA53765 (VCV51_030016)
 30.45 0.96 8.91 6.46 2.15 2.47 2.48 1.88 5.4 3.95 1.51 3.53 2.36 1.16 1.89 5.1 5.92 12.0 11.53 90.94 4.9 55.76 6.84
KNA53908 (VCV51_030835)
 192.8 10.35 26.49 18.05 9.16 7.25 9.43 8.25 33.64 6.11 5.76 17.06 18.84 8.63 14.41 28.75 26.91 24.83 26.49 32.82 8.12 296.48 39.14
KNA54938 (PilM)
 160.6 9.06 17.49 13.32 15.74 17.99 16.91 13.84 9.26 18.23 6.82 14.71 23.88 8.01 1.95 29.44 32.09 15.29 14.08 11.97 33.64 214.3 13.28
KNA54939 (VCV51_033142)
 200.8 1.37 16.25 2.47 1.97 2.65 2.4 1.56 3.71 5.22 1.35 7.73 8.17 1.44 0.87 7.21 9.43 3.69 4.12 3.63 28.01 264.58 8.35
KNA54940 (VCV51_033143)
 232.83 1.99 20.36 3.52 3.43 3.8 3.59 2.3 6.66 7.34 2.21 10.14 8.89 2.58 1.79 9.97 12.4 6.8 6.23 5.5 50.77 373.46 9.22
KNA54941 (VCV51_033144)
 312.97 2.25 22.94 4.41 2.67 2.75 3.34 2.59 6.22 7.71 2.25 12.86 7.77 2.69 1.64 14.25 17.75 6.4 6.85 5.81 60.24 421.87 13.34
KNA54942 (PilQ)
 466.87 5.68 34.21 15.74 10.73 11.26 11.64 8.12 13.74 19.38 5.9 20.3 20.02 6.32 6.56 21.02 28.22 18.63 19.71 13.13 75.8 454.62 26.67
KNA55088 (VCV51_033112)
 61.4 6.78 12.6 7.05 8.77 8.72 9.56 7.56 13.65 13.63 9.27 16.14 18.64 9.01 6.64 11.43 13.6 7.0 7.96 14.44 14.17 135.6 20.27
KNA55239 (VCV51_031084)
 71.34 1.23 27.99 9.14 4.51 3.66 4.22 3.83 9.1 9.67 3.87 10.11 5.63 1.5 13.73 14.07 10.17 6.01 5.28 39.9 7.55 100.82 5.28
KNA55240 (VCV51_031085)
 46.74 3.56 15.63 8.9 8.93 9.24 9.3 8.85 11.05 9.95 3.39 8.33 7.68 3.54 6.61 13.09 11.34 7.66 8.25 30.86 10.03 55.59 13.76
KNA55297 (VCV51_033110)
 902.78 85.53 276.97 532.29 60.07 58.21 57.02 54.62 437.04 56.97 104.1 67.12 93.81 99.05 68.03 448.5 397.98 165.64 148.91 5734.68 383.5 984.37 284.48
KNA55339 (PilW)
 361.18 5.82 118.56 68.99 6.33 7.32 7.09 6.77 86.98 14.83 7.63 26.77 21.08 6.25 10.56 74.12 67.38 13.74 14.07 92.14 70.64 893.1 97.19
KNA56408 (VCV51_030680)
 3784.43 28.49 661.53 66.16 13.82 16.04 16.39 11.82 71.79 90.4 91.41 296.33 149.03 23.2 169.64 243.81 179.99 36.82 63.52 73.39 70.59 2526.33 1100.29
KNA56409 (VCV51_030681)
 290.42 65.25 112.56 36.58 63.14 63.67 62.25 57.93 70.4 59.98 122.06 77.9 87.69 57.93 28.57 238.42 172.88 43.15 42.74 62.14 70.93 307.68 279.16
KNA56881 (VCV51_030516)
 395.37 4.67 18.97 16.56 3.73 3.41 3.61 3.72 16.95 9.45 8.57 21.03 31.03 5.11 5.3 54.6 67.66 18.77 19.31 14.51 267.3 481.55 39.59
KNA56962 (VCV51_032888)
 405.39 7.16 101.24 37.21 16.19 30.93 29.91 10.12 63.4 45.48 11.76 35.66 47.59 4.34 5.14 75.33 70.94 9.29 12.02 66.7 200.63 485.95 84.79
KNA56964 (PilW)
 4.62 0.17 1.4 0.28 0.56 0.86 0.88 0.52 1.34 0.58 0.13 0.07 0.54 0.06 0.25 0.1 0.19 0.35 0.74 0.81 1.03 1.44 0.77
KNA56966 (PilV)
 39.78 0.21 1.94 1.14 1.2 1.05 1.44 0.34 0.81 2.05 0.35 3.11 1.87 0.15 0.7 5.69 4.59 0.43 0.94 0.83 3.63 26.42 1.81
KNA57811 (VCV51_032780)
 221.68 7.72 36.32 12.18 9.94 10.93 10.03 9.93 8.77 142.75 47.28 59.13 21.7 6.69 2.74 22.46 32.82 17.82 17.62 1183.94 664.12 534.41 73.34
KNA57812 (VCV51_032781)
 4.08 1.45 1.19 1.25 0.81 0.72 0.91 0.68 1.42 5.22 1.55 6.57 2.21 1.14 1.26 2.71 2.5 4.59 5.2 15.78 7.37 10.55 2.9
KNA57820 (VCV51_032789)
 69.32 143.88 30.81 43.8 196.92 199.41 210.63 181.06 98.04 155.59 104.01 190.85 127.26 137.08 16.82 89.58 71.15 56.51 67.53 313.99 68.65 90.7 186.58
KNA57840 (VCV51_032809)
 146.1 34.31 53.0 61.14 77.38 82.32 85.18 77.12 78.5 78.83 36.16 121.14 74.34 37.75 39.55 180.46 152.21 66.05 65.09 78.48 81.83 137.89 123.83
KNA57855 (VCV51_032779)
 221.68 7.72 36.32 12.18 9.94 10.93 10.03 9.93 8.77 142.75 47.28 59.13 21.7 6.69 2.74 22.46 32.82 17.82 17.62 1183.94 664.12 534.41 73.34
KNA59382 (VCV51_031307)
 96.61 32.67 19.26 16.22 64.47 62.51 65.71 64.12 41.48 32.81 33.57 65.85 70.22 32.77 37.36 104.42 90.68 25.73 25.01 40.91 35.76 172.3 74.66
KNA59405 (VCV51_032584)
 1452.24 5.85 454.74 18.75 6.26 9.19 7.06 8.8 12.74 7.73 10.37 10.91 4.85 5.75 10.76 40.34 28.32 9.09 11.92 575.74 60.52 3220.09 9.31
KNA59608 (VCV51_031392)
 92.42 17.38 32.24 29.09 24.57 24.07 24.5 22.92 47.39 24.2 10.9 34.25 27.94 16.1 26.86 80.71 69.12 26.63 29.21 59.46 46.31 101.6 51.72
KNA59785 (VCV51_032480)
 3768.07 315.23 723.11 959.64 245.52 310.82 252.91 216.19 1039.5 641.36 201.96 297.69 582.49 286.05 151.91 322.87 585.45 287.17 320.55 1220.15 1500.34 5897.69 467.1
KNA60608 (VCV51_032197)
 3.6 0.84 1.31 1.18 0.64 0.89 0.75 0.72 1.49 5.24 1.28 5.12 2.15 0.87 1.19 1.69 2.12 3.09 3.3 11.75 6.46 7.98 2.64
KNA60609 (VCV51_032198)
 64.09 1.89 0.0 0.0 0.0 1.37 0.6 0.0 2.76 27.89 12.62 17.8 3.7 2.24 0.65 10.42 16.34 2.11 2.08 547.69 316.54 273.78 0.31
KNA60652 (VCV51_032091)
 2616.38 4.55 91.79 57.38 4.49 5.12 4.81 3.73 63.8 43.67 7.51 111.91 26.03 4.12 6.74 25.52 41.51 35.42 33.53 50.35 1054.36 3543.76 25.47
KNA60666 (VCV51_032105)
 171.95 56.53 167.79 116.31 150.85 177.46 152.99 113.04 102.2 196.5 59.18 169.25 146.26 70.27 17.96 130.26 199.51 208.96 183.77 316.38 290.48 195.7 151.1
KNA60667 (VCV51_032106)
 24.25 12.85 14.74 13.27 12.92 12.48 12.11 7.81 18.25 20.45 12.01 27.43 15.46 14.11 4.8 18.77 27.18 34.36 34.32 75.05 56.04 48.01 20.64
KNA60668 (VCV51_032107)
 19.47 15.03 11.2 6.63 3.66 5.9 4.22 2.03 15.58 6.15 12.49 31.2 4.02 10.19 3.96 8.0 12.51 16.38 13.35 91.21 64.96 45.34 13.35
KNA60669 (VCV51_032108)
 19.65 4.99 13.7 9.55 3.85 3.93 3.96 2.56 9.97 13.49 7.92 20.75 6.47 5.63 2.14 5.7 7.72 15.96 16.92 77.29 53.15 47.21 11.98
KNA60670 (IcmF)
 18.87 4.72 13.86 7.44 5.29 7.79 5.98 4.05 9.63 36.34 12.91 49.89 7.87 4.99 3.21 11.38 14.34 15.53 16.14 84.32 58.83 49.11 13.83
KNA60671 (VCV51_032110)
 14.99 4.89 9.38 5.61 1.92 3.16 2.33 1.39 7.93 22.44 7.09 47.05 4.1 4.86 2.28 9.41 11.49 11.14 11.28 88.84 57.34 53.51 8.44
KNA60672 (VCV51_032111)
 16.01 2.27 9.0 5.44 1.34 2.23 1.74 1.45 3.4 33.95 5.69 63.01 4.73 2.14 3.1 9.95 13.83 11.11 10.62 41.96 30.56 26.14 12.1
KNA60673 (VCV51_032112)
 21.92 4.68 8.63 7.66 2.44 3.06 2.66 1.76 8.56 36.12 8.39 70.52 6.16 4.18 5.77 10.62 11.25 16.12 16.0 95.4 62.68 58.95 10.07
KNA60674 (VCV51_032113)
 17.49 6.58 7.41 6.01 2.27 3.45 2.79 1.48 7.12 41.46 13.51 80.17 6.52 6.33 3.89 9.64 10.94 17.12 17.47 85.03 58.19 55.88 7.23
KNA60675 (VCV51_032114)
 15.28 4.24 5.55 3.98 2.93 4.49 3.14 2.28 4.59 49.75 13.3 74.06 5.6 4.6 2.85 5.88 6.04 7.97 8.12 72.59 52.42 47.29 7.1
KNA60676 (VCV51_032115)
 14.09 3.14 5.65 4.31 1.75 3.48 2.69 1.64 5.87 40.42 13.53 59.76 4.41 3.58 5.67 6.54 6.58 8.11 8.05 68.06 49.22 44.16 6.16
KNA60677 (VCV51_032116)
 39.44 23.42 12.2 7.66 2.94 5.5 4.16 1.79 19.57 43.7 31.19 72.15 4.98 26.39 5.77 11.46 11.98 14.07 13.12 355.06 271.06 216.59 9.4
KNA60678 (VCV51_032117)
 13.67 5.27 7.27 3.03 1.65 2.87 2.09 1.27 5.43 39.43 14.72 49.18 3.82 5.69 2.15 5.85 5.59 9.12 8.09 85.36 60.82 57.59 4.89
KNA60679 (VCV51_032118)
 13.09 2.32 8.87 3.99 1.14 1.79 1.34 0.63 3.46 20.53 5.1 39.88 1.79 3.12 3.07 5.27 5.36 3.15 3.51 37.85 29.49 22.37 6.92
KNA60680 (VCV51_032119)
 16.24 3.62 8.57 3.95 3.48 5.98 4.3 3.01 7.24 35.79 10.7 57.54 4.07 4.35 6.87 9.9 10.46 8.05 8.1 97.88 71.38 49.56 10.92
KNA60681 (VCV51_032120)
 61.3 12.79 37.6 11.82 5.36 15.55 7.98 4.0 21.8 103.54 41.67 145.73 8.62 15.97 22.62 30.57 34.83 13.68 14.4 388.36 319.62 182.68 23.34
KNA60682 (VCV51_032121)
 42.83 14.12 28.32 8.65 7.73 22.62 12.18 4.87 14.73 192.33 57.65 216.26 11.17 15.33 41.97 33.36 32.82 14.33 14.79 214.15 181.78 113.95 20.61
KNA60683 (VCV51_032122)
 53.49 11.94 52.65 10.92 6.71 20.74 11.52 4.38 12.99 196.41 76.66 162.86 12.57 14.58 135.33 26.0 24.07 17.86 15.71 167.38 127.79 85.49 30.56
KNA60684 (VCV51_032123)
 14.5 4.28 5.15 6.1 5.03 5.48 5.07 3.42 7.17 23.43 14.7 24.58 8.06 4.59 2.53 12.37 16.77 11.84 11.36 32.42 19.7 15.84 28.15
KNA60749 (VCV51_032189)
 249.71 2.4 48.13 7.61 4.63 4.66 4.19 3.66 7.41 16.58 2.62 18.4 12.87 2.67 4.84 14.46 20.65 10.42 10.31 6.22 37.85 393.22 16.9
KNA60806 (VCV51_032068)
 317.9 12.22 56.44 19.04 4.55 9.8 10.72 3.22 28.55 47.82 4.87 45.25 29.91 7.58 2.37 28.99 42.78 8.27 10.96 32.06 24.79 356.27 71.58

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)