1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_32 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA47891 (VCV51_033873)
 0.2 -0.59 -0.36 -0.3 -0.32 -0.44 -0.42 -0.39 -0.31 -0.23 -0.18 0.22 -0.11 -0.64 0.06 0.09 0.31 0.88 0.85 -0.23 -0.28 -0.21 0.8
KNA47892 (VCV51_030228)
 0.18 0.02 -0.76 -0.24 -1.18 -1.34 -1.19 -1.44 0.16 -0.52 -0.07 0.18 -0.21 0.06 -0.45 0.43 0.71 0.88 0.85 0.21 0.05 0.22 0.32
KNA50934 (VCV51_031638)
 -1.02 0.22 -1.03 -1.47 -0.84 -0.97 -0.88 -0.85 -1.59 0.01 -0.1 1.28 0.04 0.04 -0.18 1.14 0.44 1.13 1.31 -1.6 -1.55 -1.5 0.5
KNA51131 (LepA)
 -2.17 0.24 -1.6 -2.38 -0.46 -0.39 -0.24 -0.52 -1.27 -0.22 0.04 1.18 0.22 0.3 0.42 1.5 0.65 0.61 0.76 -1.57 -1.81 -1.4 0.19
KNA51132 (VCV51_031658)
 -3.46 0.64 -1.28 -4.3 0.38 0.42 0.45 0.37 -2.97 0.01 0.53 0.51 0.08 0.73 0.06 1.34 0.36 -0.13 0.13 -3.06 -3.22 -3.03 0.72
KNA51171 (VCV51_033621)
 -0.85 0.31 -1.04 -1.26 -0.33 -0.44 -0.36 -0.44 -0.23 -0.49 0.21 0.4 -0.38 0.29 0.99 -0.41 -0.9 0.9 1.01 -0.28 0.06 -0.12 0.36
KNA51539 (VCV51_033579)
 -0.24 -2.26 -2.63 -0.46 -3.56 -3.34 -3.63 -3.92 1.16 -3.23 -3.37 0.74 -3.33 -2.35 -2.38 -1.18 -0.16 1.71 2.21 0.91 0.86 1.06 0.15
KNA51807 (VCV51_033546)
 -1.55 0.41 -1.71 -2.39 -0.63 -0.71 -0.52 -0.63 -2.33 0.65 0.52 0.68 0.56 0.71 1.28 -0.08 -0.4 1.03 1.08 -2.2 -1.74 -1.62 0.26
KNA51856 (VCV51_033533)
 -0.09 -0.42 -1.19 -0.71 -1.04 -1.05 -1.05 -1.14 0.22 -0.32 -0.71 0.2 -0.35 -0.46 -0.9 0.91 1.11 0.81 0.87 0.13 0.31 0.42 0.37
KNA53340 (VCV51_031635)
 -0.08 0.04 -2.23 -2.02 -0.64 -0.59 -0.51 -0.62 -1.09 0.18 0.24 0.36 0.32 -0.08 0.02 1.14 0.44 0.76 0.96 -1.24 -1.05 0.36 0.33
KNA53341 (VCV51_031634)
 0.82 -0.59 -1.32 -1.59 0.16 0.24 0.24 0.09 -1.41 0.53 -0.18 0.79 0.28 -0.6 -0.26 0.18 -0.6 0.56 0.64 -1.71 -1.46 0.28 0.51
KNA53588 (TatB)
 -0.77 -0.72 -0.2 -1.06 -0.43 -0.41 -0.33 -0.4 -0.35 -0.42 -0.02 0.13 -0.45 -0.81 0.01 -0.2 -0.1 1.3 1.28 -0.31 -0.13 -0.27 1.17
KNA53635 (FtsY)
 0.01 0.4 -0.57 -0.56 -0.34 -0.7 -0.5 -0.67 -0.02 -0.41 -0.15 -0.2 -0.17 0.28 -0.47 0.34 0.59 0.71 0.67 -0.3 -0.3 0.02 0.7
KNA53804 (VCV51_031866)
 -0.15 0.28 -0.64 -0.8 -0.47 -0.42 -0.43 -0.66 -0.23 -0.26 -0.68 0.14 -0.13 0.31 -0.25 0.16 0.01 0.95 1.0 -0.18 0.0 -0.12 0.62
KNA53805 (VCV51_031867)
 -0.2 -0.27 -0.79 -0.93 -0.43 -0.16 -0.14 -0.54 -1.08 0.6 -0.16 0.42 0.57 -0.36 0.6 0.2 0.03 0.84 0.95 -0.9 -0.61 -0.7 0.33
KNA54615 (VCV51_030716)
 -0.65 -1.19 -2.46 -1.16 -1.15 -0.82 -0.85 -1.05 0.37 -0.69 -0.16 0.62 -0.11 -1.15 1.35 0.14 -0.37 0.91 1.25 0.11 0.29 0.38 0.32
KNA54889 (VCV51_031803)
 0.17 -0.03 -1.16 -0.78 -0.29 -0.52 -0.41 -0.6 -0.35 0.39 0.08 0.59 0.13 -0.25 -0.19 -0.28 0.06 0.66 0.84 -0.42 -0.29 0.51 0.33
KNA54899 (VCV51_031795)
 -0.1 -0.09 -0.97 -1.05 -0.67 -0.74 -0.64 -0.87 -0.6 0.05 0.12 0.78 -0.16 -0.04 0.65 -0.13 0.26 0.83 1.05 -0.86 -0.68 -0.02 0.74
KNA54924 (VCV51_033140)
 -0.36 0.23 -1.05 -1.07 -0.93 -0.75 -0.7 -0.92 -1.2 0.75 0.33 1.24 0.56 0.37 0.38 -0.19 -0.06 0.83 0.95 -1.21 -1.12 -0.67 -0.05
KNA54961 (VCV51_031747)
 -0.26 -0.35 -0.71 -0.76 -0.96 -0.86 -0.81 -0.94 -0.31 0.19 0.23 0.85 0.08 -0.55 0.92 -0.07 0.28 0.45 0.54 -0.29 -0.43 -0.14 1.0
KNA54963 (VCV51_033148)
 -0.4 0.96 -0.95 -0.9 -0.25 -0.35 -0.3 -0.34 -0.51 0.11 0.41 1.11 -0.21 0.93 0.23 -0.24 -0.05 0.09 0.2 -0.6 -0.69 -0.47 -0.33
KNA55030 (VCV51_031710)
 -0.3 0.25 -1.86 -0.85 -0.62 -0.8 -0.7 -0.7 -0.33 -0.26 0.24 0.85 0.06 0.04 0.6 0.09 -0.17 0.79 0.97 -0.63 -0.72 -0.27 0.82
KNA55031 (VCV51_031709)
 -0.72 0.41 -1.51 -1.48 -1.22 -1.17 -1.18 -1.83 -1.77 0.4 -0.03 1.05 0.51 0.22 0.13 0.76 0.26 1.4 1.48 -1.65 -2.03 -1.43 0.24
KNA55032 (VCV51_031708)
 -1.21 -0.14 -1.81 -1.76 -1.09 -0.96 -0.89 -1.1 -1.32 0.63 0.06 0.92 0.5 -0.25 1.13 0.94 0.67 0.87 0.86 -1.45 -1.74 -1.28 0.61
KNA55033 (PtsN)
 -0.89 0.36 -1.85 -1.45 -0.09 -0.05 -0.02 -0.02 -1.48 0.53 0.36 0.4 0.51 0.31 -0.0 0.55 0.42 0.53 0.42 -1.67 -1.64 -1.34 0.99
KNA55036 (VCV51_031705)
 -0.6 -0.18 -2.02 -1.09 -0.55 -0.51 -0.42 -0.55 -0.42 -0.64 -0.04 0.1 -0.17 -0.29 -0.04 0.91 0.69 1.45 1.3 -0.31 -0.52 -0.66 -0.02
KNA55037 (LptA)
 -0.39 0.16 -1.71 -0.89 -0.32 -0.46 -0.39 -0.34 0.03 -1.17 -0.22 0.0 -0.3 0.11 0.01 0.48 0.34 1.09 0.95 0.23 -0.03 -0.25 0.33
KNA55038 (VCV51_033192)
 -0.18 0.18 -1.68 -0.86 -1.02 -1.14 -1.1 -0.98 0.63 -1.65 -0.75 -1.04 -0.88 0.2 -1.06 0.5 0.37 1.09 0.77 1.08 0.72 0.46 0.5
KNA55124 (VCV51_031819)
 -1.17 0.54 -0.81 -1.56 -0.33 -0.33 -0.25 -0.35 -1.5 0.51 0.1 0.98 0.16 0.59 0.65 0.12 0.34 0.49 0.73 -1.63 -1.71 -1.39 0.62
KNA55132 (VCV51_031812)
 -0.82 -0.55 -0.94 -1.13 -0.53 -0.52 -0.52 -0.48 -0.49 -0.19 0.18 1.03 -0.08 -0.49 -0.65 0.25 0.35 1.19 1.45 -0.73 -0.75 -0.58 0.65
KNA55218 (VCV51_033050)
 -2.64 -0.18 -4.1 -3.4 -1.8 -1.75 -1.62 -1.83 -1.98 -0.43 0.49 0.95 0.2 0.18 -1.96 1.59 1.47 1.52 2.1 -2.5 -2.39 -2.48 -1.98
KNA55219 (VCV51_033051)
 -2.95 0.64 -4.64 -3.21 -1.76 -1.75 -1.48 -1.69 -1.57 -0.77 0.76 1.16 -0.18 0.94 -1.91 1.43 1.21 1.49 1.62 -1.95 -2.08 -2.03 -1.53
KNA55291 (VCV51_033104)
 -0.48 0.04 -1.54 -1.1 -0.66 -0.71 -0.48 -0.6 -1.03 -0.29 0.54 -0.01 0.14 0.02 -0.07 1.15 0.8 1.09 1.29 -1.02 -0.39 -0.85 -0.64
KNA56146 (VCV51_032986)
 -1.33 0.9 -2.44 -2.0 -0.39 -0.51 -0.3 -0.63 -1.53 0.66 1.09 0.27 -0.2 0.77 0.76 -0.38 -0.78 1.22 1.5 -1.96 -2.23 -1.45 -0.98
KNA56410 (VCV51_032965)
 -0.28 -1.37 -0.51 -0.81 -0.15 -0.31 -0.41 -0.38 -0.23 -0.54 -0.29 0.08 -0.63 -1.18 -0.21 0.66 0.16 1.39 1.41 -0.51 -0.49 -0.31 0.77
KNA57623 (VCV51_030437)
 -2.0 0.57 -1.99 -2.63 -0.57 -0.52 -0.38 -0.52 -1.79 -0.04 0.58 0.75 -0.32 0.46 0.78 0.38 0.4 1.26 1.56 -2.14 -2.34 -1.95 0.07
KNA57724 (VCV51_030417)
 -0.68 0.04 -0.46 -0.99 -0.15 -0.09 0.01 -0.16 -0.32 0.05 0.86 0.65 -0.35 -0.08 0.5 -0.31 -0.34 0.84 1.01 -0.71 -0.92 -0.45 -0.43
KNA59805 (VCV51_032495)
 -0.36 -0.19 -1.08 -1.53 -1.07 -1.1 -1.02 -0.98 -0.52 0.24 0.75 0.92 -0.09 -0.35 -0.75 -0.91 -0.6 1.59 1.73 -0.84 -0.82 0.12 0.11
KNA59962 (VCV51_032374)
 -1.25 -0.12 -2.08 -1.89 0.1 0.09 0.12 0.11 -1.28 0.56 -0.64 0.63 -0.01 -0.29 -0.07 -0.41 -0.06 1.41 1.59 -1.29 -1.47 -1.0 0.43
KNA60574 (VCV51_032245)
 -1.61 -0.53 -2.06 -1.97 0.26 0.27 0.24 0.23 0.04 -0.64 -1.13 -0.57 -0.53 -0.66 -1.2 -1.26 -0.51 1.48 1.69 -0.2 -0.19 -0.1 1.24
KNA60798 (VCV51_032060)
 -3.59 0.3 -4.74 -3.97 -1.41 -1.06 -0.96 -1.44 -2.6 0.54 0.93 0.77 1.16 0.45 -0.96 -0.21 0.14 1.88 1.81 -2.88 -2.75 -2.62 -0.12
KNA60799 (VCV51_032061)
 -2.47 0.68 -3.83 -2.57 -1.52 -1.17 -1.08 -1.46 -1.67 -0.26 0.46 0.54 0.5 0.88 -0.89 0.46 1.07 1.57 1.82 -1.69 -1.92 -1.71 -0.45
KNA60826 (VCV51_032016)
 -0.45 -0.47 -1.69 -0.87 0.19 -0.04 0.02 0.01 -0.32 -0.11 -0.44 -0.07 -0.66 -0.46 0.2 -0.91 -0.33 1.3 1.43 -0.4 -0.33 -0.29 0.83
KNA60949 (VCV51_031924)
 -1.26 1.8 -2.28 -1.82 -0.97 -1.07 -0.94 -1.05 -1.33 0.54 0.45 0.94 0.78 1.49 0.63 -0.25 0.31 -0.38 -0.5 -1.27 -1.3 -1.19 -0.72
KNA60950 (VCV51_031925)
 -1.62 1.47 -2.21 -2.03 -0.89 -1.01 -0.92 -0.75 -1.94 0.63 0.31 1.7 0.58 1.14 -0.02 0.04 0.44 0.34 0.32 -2.03 -2.0 -1.81 -0.69
KNA60952 (VCV51_031927)
 -0.78 -0.33 -1.43 -1.08 -1.38 -0.98 -0.94 -1.14 0.26 -0.61 0.09 0.81 -0.39 -0.38 0.54 -0.74 -0.04 1.17 1.48 -0.13 -0.19 0.06 0.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.