Heatmap: Cluster_18 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA47633 (VCV51_033879)
-0.92 -0.31 -2.69 -1.28 -0.38 -0.63 -0.58 -0.59 -0.39 -0.32 -1.03 -0.82 0.12 -0.16 -0.34 0.56 0.73 1.66 1.74 -0.07 -0.01 -0.21 -1.02
KNA49119 (VCV51_033807)
-0.22 -0.77 -1.68 -0.88 -0.48 -0.48 -0.5 -0.52 -0.34 -0.98 -0.57 -0.28 -1.24 -0.69 -1.44 0.1 0.12 1.92 1.9 -0.33 -0.31 -0.15 0.54
KNA49514 (VCV51_030315)
-0.56 0.11 -1.69 -1.07 0.04 -0.01 -0.04 -0.06 -0.36 -0.18 -0.17 -0.19 -0.49 -0.11 -0.86 0.09 0.41 1.33 1.41 -0.47 -0.27 -0.37 -0.02
KNA50251 (VCV51_030283)
-0.34 -0.52 -0.82 -0.53 -1.38 -1.33 -1.23 -1.46 -0.15 -0.43 -0.88 -0.08 -0.55 -0.64 -0.56 0.03 0.2 1.84 1.78 -0.07 -0.06 0.11 0.49
KNA50938 (VCV51_033646)
-0.02 0.05 -1.3 -0.39 -2.06 -2.08 -2.17 -2.13 -0.41 -0.55 -0.44 0.9 -0.24 -0.15 -0.05 0.89 0.09 1.5 1.51 -0.23 -0.72 -0.25 0.29
KNA50939 (YqiA)
0.09 -0.04 -0.96 -0.36 -1.04 -1.3 -1.58 -1.26 -0.52 -0.33 -0.38 0.21 0.16 -0.2 -0.47 1.14 0.61 1.16 1.32 -0.36 -0.89 -0.45 0.49
KNA51142 (RumA)
-0.14 -0.18 -0.86 -0.52 -1.21 -1.22 -1.15 -1.34 -0.75 0.12 -0.54 0.66 0.1 -0.22 0.63 0.5 -0.15 1.42 1.38 -0.69 -0.81 -0.58 0.46
KNA51143 (VCV51_031646)
-0.62 -0.34 -1.53 -0.89 -1.3 -1.19 -1.17 -1.38 -0.79 0.44 -0.37 0.64 0.52 -0.31 -0.21 1.06 0.44 1.36 1.46 -0.86 -0.99 -0.62 0.21
KNA51144 (VCV51_033635)
-0.59 -0.36 -0.63 -0.48 -1.19 -1.09 -1.03 -1.37 0.22 0.44 -0.32 0.7 0.47 -0.44 -0.46 1.26 0.56 0.91 0.81 -0.22 -0.54 -0.3 -0.38
KNA51172 (VCV51_031667)
-0.41 -0.39 -0.35 -0.85 -0.61 -0.59 -0.5 -0.66 -0.62 0.03 -0.04 0.39 -0.1 -0.55 0.87 0.64 0.03 0.89 1.06 -0.74 -0.11 -0.54 0.44
KNA51173 (VCV51_033622)
-0.41 -0.6 -0.68 -0.77 -0.9 -0.92 -0.8 -0.99 -0.59 -0.01 -0.64 0.37 0.06 -0.66 0.09 1.23 0.65 0.88 1.07 -0.59 0.12 -0.42 0.63
KNA51540 (VCV51_033580)
-0.6 -0.25 -0.42 -0.45 -0.96 -0.93 -1.02 -1.17 0.45 -0.68 -0.27 0.13 -1.26 -0.35 0.47 -1.38 -0.86 1.65 1.64 0.17 0.3 0.02 -0.02
KNA51650 (VCV51_031509)
-0.46 0.05 -0.84 -0.81 -0.67 -0.62 -0.52 -0.76 -0.44 -0.06 -0.21 0.6 -0.24 -0.0 0.72 0.59 0.4 0.83 1.03 -0.45 -0.46 -0.33 0.11
KNA51659 (VCV51_031501)
0.29 0.22 -1.24 -0.44 -1.0 -1.18 -0.93 -1.29 0.14 -0.32 -0.25 -0.34 -0.47 0.34 -0.25 0.47 0.28 0.89 1.04 0.1 0.05 0.36 0.38
KNA51669 (VCV51_031492)
-0.55 -0.27 -2.71 -1.2 -1.06 -1.3 -0.96 -1.17 -0.94 -0.52 -0.16 0.34 0.35 -0.59 0.76 0.48 0.09 1.65 1.77 -1.09 -0.97 -0.76 0.56
KNA52719 (VCV51_031554)
-0.0 -0.7 -0.83 -0.54 -0.97 -0.92 -0.85 -1.18 -0.31 0.42 -0.38 0.41 -0.05 -0.77 0.01 0.76 0.6 0.8 1.01 -0.29 0.27 -0.07 0.47
KNA52720 (VCV51_031553)
-0.04 -0.31 -0.76 -0.35 -1.25 -1.26 -1.12 -1.41 -0.5 0.46 -0.54 0.63 -0.14 -0.37 -0.24 0.48 0.32 1.12 1.34 -0.46 0.56 -0.11 -0.25
KNA52721 (VCV51_031552)
0.31 -1.41 -0.63 0.17 -1.01 -0.98 -0.91 -1.19 -0.23 0.36 -1.08 0.47 -0.22 -1.58 -0.7 0.73 0.59 1.02 1.1 -0.2 0.53 0.02 0.23
KNA52734 (VCV51_033375)
-0.13 -1.76 -0.45 -0.4 -0.7 -0.43 -0.61 -0.68 0.17 -0.21 -1.24 -0.98 -0.57 -1.88 -1.34 0.14 0.04 1.85 1.62 -0.01 0.16 0.2 0.41
KNA53021 (VCV51_033368)
-0.45 -0.03 -1.49 -0.46 -1.78 -1.93 -1.93 -1.94 0.28 0.18 -0.42 -0.75 0.01 -0.42 -1.74 -0.21 -0.32 1.47 1.65 0.12 0.33 0.39 1.11
KNA53048 (VCV51_031582)
0.02 -0.95 -1.36 -0.51 -1.34 -1.26 -1.15 -1.51 0.2 -0.05 -0.22 0.15 -0.06 -1.08 -0.63 0.94 0.43 1.04 1.2 0.17 0.15 0.32 0.6
KNA53053 (VCV51_033360)
0.2 -1.07 -1.08 -0.29 -1.36 -1.46 -1.37 -1.47 -0.47 0.15 -0.67 0.75 0.15 -1.24 -0.36 1.42 0.74 0.65 0.87 -0.33 -0.6 -0.33 1.09
KNA53346 (VCV51_033339)
0.16 -0.85 -0.72 -0.59 -1.35 -1.6 -1.5 -1.48 -0.34 -0.1 -0.66 0.25 -0.18 -0.89 -0.02 0.04 -0.49 1.71 1.72 -0.23 -0.13 0.26 0.49
KNA54614 (VCV51_030714)
-0.03 -0.2 0.13 -0.5 -1.6 -1.61 -1.49 -1.75 -0.19 -0.19 -0.37 0.59 -0.01 -0.3 -0.2 0.85 0.6 0.9 1.02 -0.23 -0.35 0.08 0.52
KNA54616 (VCV51_030717)
-0.9 -2.02 -1.98 -1.53 -1.13 -0.72 -0.69 -1.19 -0.95 -0.06 0.02 1.01 0.62 -2.11 0.82 0.61 0.44 1.37 1.95 -1.06 -0.67 -0.9 -1.09
KNA54617 (VCV51_030718)
-0.55 -1.04 -1.5 -0.91 -1.66 -1.56 -1.38 -1.92 -0.74 -0.11 -0.04 1.38 0.4 -1.12 1.36 0.85 0.59 0.86 1.31 -0.58 -0.3 -0.48 -1.31
KNA54618 (VCV51_030719)
-0.12 -0.94 -1.95 -0.49 -1.06 -0.96 -0.85 -1.16 -0.72 0.28 0.05 0.8 0.93 -1.14 0.58 0.24 0.0 0.98 1.58 -0.35 -0.19 -0.27 -0.93
KNA54619 (VCV51_033209)
-0.33 -2.0 -1.95 -0.69 -0.76 -0.85 -0.64 -1.12 -0.89 -0.1 -0.54 0.89 0.31 -2.04 1.18 1.14 1.15 0.75 1.23 -0.68 -0.27 -0.56 -1.02
KNA54663 (VCV51_030752)
-1.05 -2.93 -0.56 -1.46 -1.7 -1.67 -1.4 -1.9 -0.95 -1.18 -1.98 -0.6 -0.8 -2.71 -2.17 -0.29 -0.82 2.35 2.55 -0.54 -0.82 -0.62 1.6
KNA54664 (VCV51_030753)
-0.45 -1.28 -1.18 -1.23 -0.97 -0.94 -0.87 -1.04 -0.32 -0.76 -1.34 -0.78 -0.54 -1.13 -1.43 0.88 0.63 1.74 1.88 0.27 -0.3 -0.13 0.76
KNA54921 (VCV51_031781)
-0.23 0.42 -0.93 -0.31 -1.4 -1.45 -1.32 -1.38 -0.06 0.02 -0.08 0.4 -0.16 0.39 -0.25 -0.55 -0.11 1.35 1.49 -0.48 -0.29 -0.34 0.46
KNA54934 (VCV51_031770)
-0.61 0.03 -1.72 -0.99 -1.36 -1.3 -1.29 -1.33 -1.19 -0.08 -1.17 0.06 -0.11 0.5 -1.08 -0.21 0.19 2.0 2.14 -1.31 -1.27 -0.94 0.55
KNA54935 (VCV51_031769)
-1.21 0.53 -2.74 -1.81 -1.11 -1.13 -1.02 -0.93 -1.49 -1.32 -0.93 -0.69 -1.32 1.05 -1.16 -1.22 -1.0 2.29 2.54 -1.41 -1.13 -0.85 -0.14
KNA54969 (VCV51_033153)
0.18 -0.57 -0.46 -0.67 -2.22 -2.18 -2.14 -2.22 0.05 -0.8 0.26 0.49 -0.52 -0.72 -0.8 -1.0 -0.61 1.72 1.87 -0.13 0.58 0.51 -0.08
KNA54970 (VCV51_031736)
0.11 -0.3 -0.29 -0.45 -1.51 -1.46 -1.3 -1.48 0.03 -0.9 0.19 0.29 -0.75 -0.52 -0.11 -0.81 -0.37 1.29 1.48 -0.07 0.66 0.39 0.6
KNA55011 (VCV51_033187)
0.21 -1.39 -0.45 -0.63 -0.26 -0.0 -0.44 -0.35 0.36 -1.06 -1.21 -0.62 -0.69 -1.41 -2.59 0.19 -0.1 1.46 1.61 0.21 0.22 0.35 0.32
KNA55035 (VCV51_031706)
0.31 -1.33 -0.13 0.15 -2.11 -1.84 -1.78 -2.27 0.47 0.23 -1.27 0.3 0.13 -1.36 -1.34 0.68 0.54 0.97 0.78 0.58 0.8 0.5 -0.21
KNA55099 (VCV51_031837)
0.26 0.29 -0.56 -0.84 -0.84 -0.89 -0.76 -1.13 -0.05 0.31 0.72 0.71 0.03 0.34 -0.07 -0.16 0.05 -0.41 -0.38 -0.19 0.9 0.51 -0.22
KNA55100 (VCV51_031836)
0.23 -0.13 -0.53 -0.53 -0.92 -0.83 -0.73 -1.0 -0.58 0.24 0.43 1.18 0.22 -0.13 -0.76 0.39 0.69 0.0 0.13 -0.51 0.72 0.02 -0.31
KNA55101 (VCV51_031835)
0.45 -0.85 -0.42 -0.14 -1.28 -1.15 -1.07 -1.35 -0.66 0.43 0.02 1.15 0.15 -0.88 -0.53 1.01 1.29 -0.32 -0.45 -0.42 0.75 0.03 -0.53
KNA55102 (VCV51_031834)
0.43 -1.08 -0.5 -0.14 -1.09 -0.96 -0.88 -1.21 -0.2 0.36 -0.24 1.26 -0.05 -1.05 -0.12 0.57 0.87 -0.28 -0.37 -0.12 1.01 0.33 -0.45
KNA55103 (VCV51_033115)
0.51 -0.87 -0.02 0.07 -0.36 -0.4 -0.27 -0.53 -0.04 0.16 0.37 -0.0 -0.02 -1.12 -1.08 -0.46 0.04 0.52 0.32 0.03 1.13 0.33 -0.49
KNA55104 (VCV51_033116)
0.2 -1.13 -0.94 -0.24 -1.26 -1.13 -1.04 -1.37 0.34 -0.34 -0.44 0.72 -0.43 -0.98 -0.84 0.26 0.47 0.59 0.4 0.39 1.35 0.74 0.11
KNA55105 (VCV51_033117)
0.6 -0.95 -0.81 0.19 -1.13 -1.13 -1.0 -1.11 0.07 -0.32 -0.76 0.88 -0.77 -1.2 -1.05 0.49 0.9 0.39 0.18 0.19 1.11 0.57 0.13
KNA55106 (VCV51_033118)
0.58 -0.8 -0.24 0.11 -1.34 -1.39 -1.29 -1.51 0.29 -0.37 -0.73 0.01 -0.67 -0.89 -1.32 0.4 0.75 0.75 0.65 0.41 1.28 0.74 -0.67
KNA55107 (VCV51_031833)
0.52 -0.81 -0.01 -0.0 -1.45 -1.52 -1.4 -1.74 0.3 -0.77 -0.42 0.37 -0.66 -0.97 -0.82 0.18 0.58 0.92 0.84 0.18 1.11 0.63 -0.17
KNA55108 (VCV51_031832)
-0.34 -0.32 -0.37 -0.81 -0.99 -0.85 -0.81 -1.14 -0.05 0.29 0.2 0.62 -0.08 -0.28 0.14 -0.09 0.24 0.9 0.95 -0.22 0.65 0.26 -0.54
KNA55109 (VCV51_033119)
-0.18 -0.79 0.06 -0.49 -1.32 -1.13 -1.0 -1.35 -0.92 0.35 0.3 0.83 0.22 -0.97 0.03 0.49 0.72 1.02 1.08 -1.01 -0.05 -0.42 0.15
KNA55110 (VCV51_031831)
0.09 -0.42 -0.15 -0.28 -1.66 -1.64 -1.48 -1.77 -0.4 0.47 0.08 0.6 0.06 -0.43 -0.28 0.48 0.69 0.95 0.97 -0.5 0.26 -0.03 0.1
KNA55114 (VCV51_031827)
-0.1 -0.73 -0.38 -1.04 -0.13 -0.25 -0.08 -0.53 0.04 -0.82 -1.34 -0.14 -1.71 -0.88 -0.55 -1.56 -1.21 1.74 1.55 0.81 -0.13 0.83 -0.11
KNA55230 (VCV51_031075)
-0.77 -1.12 -2.15 -1.07 -1.01 -1.35 -1.11 -1.03 0.05 -0.69 -1.53 -0.88 -1.09 -1.12 -1.73 0.12 -0.28 2.49 2.15 0.17 -0.1 0.06 -0.82
KNA55231 (VCV51_031076)
-0.03 -0.9 -1.5 -0.14 -1.11 -1.71 -1.41 -1.51 0.11 -0.86 -1.65 -0.19 -1.23 -0.86 -1.62 0.38 0.23 2.05 1.85 0.3 -0.07 0.35 -0.14
KNA55344 (VCV51_031037)
-0.18 -0.72 0.53 -0.53 -1.57 -1.5 -1.42 -1.79 -0.21 0.22 -1.61 0.87 -0.21 -0.89 -1.57 1.4 1.09 0.76 1.11 -0.63 -0.61 -0.41 0.51
KNA55345 (VCV51_031038)
-0.06 -0.72 -0.4 -0.18 -1.13 -0.87 -0.84 -1.28 0.6 0.47 -1.01 0.44 0.05 -0.89 -1.64 0.89 0.55 0.3 0.62 0.22 0.36 0.5 0.28
KNA55855 (VCV51_030952)
-0.39 -1.08 -1.39 -1.02 -1.26 -1.04 -0.93 -1.32 0.11 0.23 -1.04 0.97 0.37 -1.06 -0.54 1.48 0.34 0.83 1.02 -0.1 -0.21 0.18 0.14
KNA55856 (VCV51_030953)
0.51 -1.69 0.01 0.04 -1.18 -1.33 -1.14 -1.48 0.1 0.23 -1.33 0.14 0.36 -1.79 -1.3 0.7 0.01 1.08 1.32 0.3 0.21 0.28 0.0
KNA56024 (VCV51_030940)
0.08 -0.69 -1.42 -0.67 -1.22 -1.3 -1.26 -1.3 0.73 -0.24 -0.04 0.52 -0.72 -0.89 0.04 0.2 -0.01 0.89 1.15 0.38 0.51 0.67 0.06
KNA56026 (VCV51_030942)
-0.14 -2.14 -0.88 0.04 0.01 -0.12 -0.01 0.11 0.95 0.0 -0.99 -0.05 -0.93 -2.08 -1.33 0.15 0.21 0.73 0.74 0.55 0.44 0.62 -0.35
KNA56288 (VCV51_030606)
0.25 0.02 -1.05 -0.55 -0.84 -1.16 -0.66 -1.13 0.09 -0.27 -0.74 0.18 -0.18 0.18 -0.75 -0.42 -0.62 1.4 1.37 0.1 0.5 0.54 -0.41
KNA56414 (VCV51_030685)
0.1 -1.17 -2.17 -0.49 -1.37 -1.16 -1.19 -1.44 0.11 0.1 -0.39 0.27 -0.21 -1.3 -0.9 0.93 0.71 1.08 1.11 0.11 0.64 0.49 0.18
KNA58244 (VCV51_032752)
-0.2 0.08 -2.49 -0.82 -0.57 -0.72 -0.8 -0.84 0.4 -0.62 -1.33 0.23 -0.14 0.54 -1.23 0.88 -0.98 1.32 1.29 0.13 -0.06 0.43 -0.16
KNA58245 (VCV51_032753)
-0.21 -0.07 -1.63 -0.66 -0.95 -0.97 -0.83 -1.15 -0.23 -0.2 -0.94 0.87 -0.33 -0.3 -0.31 1.03 0.68 0.98 1.1 -0.22 -0.49 -0.07 0.49
KNA58527 (VCV51_031170)
-0.13 0.51 -1.61 -0.63 -1.19 -1.33 -1.2 -1.38 -0.28 0.1 -0.8 0.32 -0.15 0.21 -0.5 0.75 0.53 1.26 1.45 -0.41 -0.57 -0.17 -0.04
KNA58528 (VCV51_031171)
-0.4 -0.97 -1.69 -0.75 -1.76 -1.73 -1.72 -1.45 0.54 0.08 -1.5 -1.21 -1.09 -1.08 -1.92 0.31 0.06 1.83 2.08 0.48 0.38 0.44 -0.11
KNA58600 (VCV51_031109)
-0.32 -0.54 -1.23 -0.66 -0.59 -0.45 -0.45 -0.54 0.08 -0.2 -0.54 0.55 -0.16 -0.58 -0.46 0.88 0.69 0.61 0.68 0.34 -0.57 0.15 0.7
KNA58616 (VCV51_031095)
0.05 -1.51 -0.5 0.27 -1.86 -1.46 -1.55 -1.92 0.69 -0.57 -2.02 0.47 -1.08 -1.75 0.22 0.46 0.5 0.86 0.92 0.58 1.01 0.45 0.29
KNA58619 (VCV51_032742)
0.03 -0.92 -1.65 -1.11 -3.83 -2.92 -3.2 -4.24 0.07 -1.46 -1.43 -3.09 -1.17 -1.52 -3.27 -1.01 -1.97 2.62 2.54 0.77 0.66 0.52 -3.9
KNA59353 (VCV51_031333)
-0.11 -0.33 -1.96 -0.97 -1.17 -1.47 -1.17 -1.14 -0.37 0.21 -0.08 0.56 0.26 -0.42 -0.59 -0.02 -0.2 1.38 1.43 -0.4 1.13 0.02 -0.46
KNA59426 (VCV51_031282)
-0.05 -1.46 -1.08 -0.18 -0.98 -0.87 -0.8 -1.06 -0.37 0.45 -0.8 0.88 0.06 -1.4 -0.74 0.96 0.76 0.92 0.99 -0.45 -0.71 -0.39 1.02
KNA59743 (VCV51_032438)
-0.69 -0.39 -1.52 -1.31 -0.98 -1.2 -0.97 -1.11 -0.05 -1.71 -1.14 0.56 -2.14 -0.31 -2.37 0.09 -1.18 2.44 2.1 -0.43 -0.55 -0.23 0.02
KNA59744 (VCV51_032439)
-0.45 -0.67 -1.15 -1.11 -2.73 -3.0 -3.13 -2.71 0.04 -1.96 -0.96 0.16 -2.23 -0.41 -3.05 0.48 -1.19 2.58 2.46 -0.19 -0.03 -0.08 -4.13
KNA59901 (VCV51_032312)
-0.93 -2.18 -1.01 -0.25 -0.28 -0.28 -0.31 -0.34 0.45 -0.43 -2.17 -0.47 -0.58 -2.63 -1.38 -1.41 -0.89 1.89 1.97 -0.19 -0.16 0.0 1.07
KNA59970 (VCV51_032382)
0.25 -3.31 -3.77 -0.51 -1.33 -2.28 -1.58 -1.21 1.26 -2.66 -2.78 -1.66 0.27 -3.35 -3.51 -0.67 0.3 2.22 1.75 0.5 0.61 0.96 -1.33
KNA60546 (VCV51_032217)
-0.65 -1.29 -1.94 -0.82 -1.21 -0.96 -1.1 -1.49 -0.68 0.07 -2.71 0.04 -0.88 -1.49 -1.63 -0.93 -0.72 2.61 2.45 -0.88 -1.19 -0.37 -0.31
KNA60923 (VCV51_031897)
-0.05 -0.95 -2.78 -0.5 -1.19 -1.28 -1.64 -1.5 0.57 -1.29 -0.24 -0.63 0.32 -0.98 -3.12 0.18 0.41 1.96 1.83 0.16 -0.18 0.37 -0.56
KNA61033 (VCV51_032008)
-3.03 -1.0 -2.27 -3.45 -0.27 -0.44 -0.54 -0.41 -2.67 -0.99 0.37 -0.04 -0.53 -0.99 -1.11 -0.47 0.17 2.74 2.41 -2.66 -2.49 -3.1 -2.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.